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Os03g0295400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ferredoxin.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.83 (0.0207) R2 : 0.474
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.04 (0.052) R2dC : 0.458 R2C : 0.458
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.143 (0.0436) R2dN8 : 0.0161 R2N8 : 0.0163
σ : 0.391
deviance : 69.92
__
_____
C
peak time of C : 15.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.88 0.348 9.86 -0.486 0.89 0.581 0.588 1.15 -0.235 15.8 37.95 85 -- --
56.8 0.351 9.86 -0.441 0.887 0.523 0.75 -- -0.228 15.7 37.63 69 -- --
55.72 0.348 9.86 -0.488 0.903 0.544 -- 1.33 -0.234 15.7 37.63 80 -- --
59.01 0.358 9.85 -0.443 0.889 0.503 -- -- -0.218 15.8 37.63 69 -- --
66.55 0.38 9.83 -0.475 -- 0.907 -- 1.09 -0.0393 -- 0.1701 421 -- --
62.06 0.369 9.85 -0.5 1.02 -- 0.714 -- -0.202 15.3 -- -- -- --
63.69 0.374 9.84 -0.486 1.03 -- -- -- -0.198 15.3 -- -- -- --
64.59 0.374 9.85 -0.586 -- 0.907 -- -- -0.226 -- 0.18 424 -- --
64.66 0.375 9.84 -- 0.916 0.503 -- -- -0.17 15.7 37.63 69 -- --
123.4 0.519 9.84 -0.53 -- -- -- -- -0.225 -- -- -- -- --
69.92 0.391 9.83 -- 1.04 -- -- -- -0.143 15.3 -- -- -- --
73.13 0.398 9.84 -- -- 0.921 -- -- -0.173 -- 0.57 429 -- --
130.81 0.534 9.83 -- -- -- -- -- -0.166 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.80 temperature 10.0 270 > th dose dependent rect. 5 8
2 46.97 temperature 15.0 270 > th dose dependent rect. 6 6
10 47.44 temperature 20.0 90 > th dose dependent rect. 8 6
14 47.69 temperature 20.0 10 > th dose dependent rect. 8 6
24 47.94 temperature 20.0 270 > th dose dependent rect. 8 2
78 49.11 temperature 30.0 90 < th dose dependent rect. 3 16
80 49.15 temperature 25.0 90 > th dose dependent sin 6 NA
107 49.69 radiation 40.0 90 < th dose independent rect. 3 16
114 49.73 temperature 10.0 90 > th dose dependent rect. 8 18
116 49.74 temperature 10.0 10 > th dose dependent rect. 8 18
136 49.87 temperature 25.0 90 > th dose dependent rect. 19 19
154 50.07 temperature 10.0 10 > th dose dependent rect. 8 16
169 50.16 temperature 30.0 10 < th dose dependent rect. 4 15
221 50.49 wind 9.0 270 < th dose dependent rect. 6 7
308 50.88 temperature 30.0 90 < th dose independent rect. 3 16
368 51.24 wind 5.0 270 < th dose independent rect. 6 7
379 51.31 temperature 25.0 270 > th dose independent rect. 6 5
393 51.38 temperature 25.0 270 > th dose independent rect. 8 2
404 51.43 temperature 10.0 270 > th dose dependent rect. 6 18
409 51.44 radiation 40.0 90 < th dose dependent rect. 3 16
451 51.65 wind 7.0 90 < th dose independent rect. 8 19
469 51.72 radiation 40.0 10 < th dose independent rect. 4 16
554 52.05 temperature 30.0 10 < th dose dependent sin 1 NA
562 52.05 radiation 40.0 90 < th dose dependent rect. 3 14
566 52.06 temperature 10.0 30 > th dose dependent sin 2 NA
572 52.09 temperature 25.0 270 < th dose independent rect. 1 10
575 52.10 wind 7.0 270 < th dose independent rect. 6 19
605 52.17 temperature 25.0 90 > th dose independent rect. 8 6
623 52.22 wind 5.0 270 < th dose independent rect. 1 5
632 52.24 radiation 40.0 270 < th dose independent rect. 11 19
641 52.25 radiation 40.0 270 < th dose dependent rect. 1 16
656 52.29 atmosphere 995.0 270 > th dose independent rect. 13 17
658 52.29 radiation 20.0 270 < th dose dependent rect. 1 13
660 52.29 wind 9.0 270 < th dose dependent rect. 6 18
670 52.32 precipitation 0.1 90 < th dose independent rect. 3 5
672 52.32 precipitation 0.1 90 < th dose dependent rect. 3 5
687 52.35 wind 5.0 90 < th dose independent rect. 3 5
688 52.35 temperature 15.0 270 > th dose independent rect. 13 17
709 52.39 radiation 40.0 90 < th dose independent rect. 11 21
719 52.41 radiation 1.0 270 > th dose dependent rect. 6 5
725 52.42 temperature 10.0 270 > th dose dependent rect. 19 16
735 52.44 wind 7.0 270 < th dose independent rect. 5 21
739 52.46 precipitation 0.1 270 < th dose independent rect. 3 2
740 52.46 radiation 20.0 270 < th dose dependent sin 7 NA
741 52.46 precipitation 0.1 270 < th dose dependent rect. 3 2
747 52.47 precipitation 0.1 270 < th dose independent rect. 13 17
750 52.47 precipitation 0.1 270 < th dose dependent rect. 13 17
758 52.49 radiation 1.0 270 > th dose dependent rect. 9 1
778 52.52 precipitation 0.1 270 < th dose independent rect. 2 15
783 52.52 precipitation 0.1 270 < th dose dependent rect. 2 15
786 52.53 radiation 40.0 270 > th dose independent rect. 9 1
788 52.53 humidity 50.0 270 > th dose independent rect. 6 7
790 52.53 wind 9.0 90 < th dose dependent rect. 8 7
818 52.56 wind 7.0 90 < th dose independent rect. 8 7
822 52.56 radiation 40.0 90 < th dose dependent sin 4 NA
836 52.59 atmosphere 995.0 270 > th dose independent rect. 2 15
838 52.59 wind 9.0 90 < th dose dependent rect. 2 6
851 52.62 humidity 90.0 90 < th dose independent rect. 8 7
852 52.62 temperature 15.0 90 > th dose independent rect. 15 17
855 52.63 wind 5.0 270 < th dose independent rect. 2 3
885 52.69 temperature 10.0 90 > th dose independent rect. 3 5
887 52.69 temperature 30.0 90 < th dose independent rect. 3 5
888 52.69 humidity 50.0 90 > th dose independent rect. 3 5
890 52.69 atmosphere 995.0 90 > th dose independent rect. 3 5
891 52.69 atmosphere 1015.0 90 < th dose independent rect. 3 5
893 52.69 temperature 10.0 90 > th dose independent rect. 8 19
898 52.71 temperature 25.0 270 < th dose independent rect. 3 2
905 52.72 precipitation 0.1 10 < th dose independent rect. 2 6
906 52.72 precipitation 0.1 270 < th dose independent rect. 6 7
913 52.72 precipitation 0.1 10 < th dose dependent rect. 2 6
914 52.72 precipitation 0.1 270 < th dose dependent rect. 6 7
926 52.74 radiation 40.0 90 < th dose independent rect. 3 5
937 52.75 temperature 15.0 90 > th dose independent rect. 8 7
938 52.75 atmosphere 995.0 270 > th dose independent rect. 6 7
939 52.75 atmosphere 1015.0 270 < th dose independent rect. 6 7
942 52.75 radiation 40.0 90 < th dose independent rect. 13 19
961 52.78 wind 9.0 90 < th dose dependent rect. 8 18
963 52.79 radiation 1.0 270 > th dose dependent sin 9 NA
967 52.80 radiation 1.0 90 > th dose dependent rect. 8 6
992 52.83 precipitation 0.1 90 < th dose independent rect. 8 19
1000 52.83 precipitation 0.1 90 < th dose dependent rect. 8 19