Os03g0295300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0295300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.73 | 0.479 | 7.32 | -1.74 | 1.73 | 2.97 | -0.623 | 5.21 | -0.744 | 16.5 | 10.01 | 245 | -- | -- |
| 116.68 | 0.503 | 7.39 | -2.28 | 1.62 | 2.4 | 0.415 | -- | -0.91 | 16.3 | 21.18 | 255 | -- | -- |
| 104.53 | 0.476 | 7.33 | -1.84 | 1.73 | 2.96 | -- | 4.65 | -0.773 | 16.6 | 14.11 | 240 | -- | -- |
| 116.74 | 0.503 | 7.4 | -2.36 | 1.6 | 2.45 | -- | -- | -0.921 | 16.3 | 21.28 | 255 | -- | -- |
| 214.86 | 0.683 | 7.37 | -2.21 | -- | 3.86 | -- | 3.34 | -1.05 | -- | 18.77 | 219 | -- | -- |
| 213.04 | 0.684 | 7.33 | -1.89 | 2.62 | -- | 1.23 | -- | -0.533 | 16.6 | -- | -- | -- | -- |
| 217.08 | 0.69 | 7.33 | -1.88 | 2.63 | -- | -- | -- | -0.526 | 16.5 | -- | -- | -- | -- |
| 210.79 | 0.676 | 7.42 | -2.66 | -- | 3.68 | -- | -- | -1.08 | -- | 23.16 | 241 | -- | -- |
| 258.06 | 0.748 | 7.32 | -- | 1.96 | 1.67 | -- | -- | -0.542 | 16.4 | 22 | 275 | -- | -- |
| 586.7 | 1.13 | 7.31 | -1.98 | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
| 310.07 | 0.824 | 7.28 | -- | 2.67 | -- | -- | -- | -0.317 | 16.5 | -- | -- | -- | -- |
| 384.71 | 0.914 | 7.32 | -- | -- | 3.26 | -- | -- | -0.641 | -- | 24.17 | 244 | -- | -- |
| 690.14 | 1.23 | 7.26 | -- | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 2 | 102.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 6 | 102.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 13 | 104.10 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 32 | 107.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 36 | 107.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 43 | 107.79 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 157 | 114.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 250 | 116.25 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 258 | 116.37 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 394 | 118.38 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 403 | 118.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 421 | 118.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 15 |
| 455 | 119.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 542 | 119.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 635 | 120.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 688 | 120.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 766 | 121.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 774 | 121.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 870 | 122.02 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 990 | 122.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |