Os03g0290900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os03g0290900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 251.49 | 0.745 | 4.84 | -6.43 | 0.711 | -0.493 | -0.519 | -5.45 | -0.566 | 6.59 | 1.115 | 21491 | -- | -- |
| 270.85 | 0.767 | 4.54 | -5.23 | 0.662 | -1.08 | -1.13 | -- | -0.0218 | 7.14 | 21.88 | 31830 | -- | -- |
| 247.64 | 0.733 | 4.83 | -6.39 | 0.731 | -0.478 | -- | -5.41 | -0.548 | 6.61 | 1.211 | 27416 | -- | -- |
| 266.99 | 0.761 | 4.57 | -5.03 | 0.697 | -0.969 | -- | -- | -0.00426 | 6.76 | 21.83 | 31828 | -- | -- |
| 271.92 | 0.768 | 4.83 | -6.42 | -- | -0.35 | -- | -5.39 | -0.581 | -- | 1.461 | 28572 | -- | -- |
| 292.33 | 0.802 | 4.63 | -4.93 | 0.7 | -- | -0.403 | -- | -0.233 | 6.8 | -- | -- | -- | -- |
| 292.74 | 0.801 | 4.62 | -4.94 | 0.698 | -- | -- | -- | -0.232 | 6.85 | -- | -- | -- | -- |
| 286.05 | 0.788 | 4.54 | -4.78 | -- | -1.02 | -- | -- | 0.223 | -- | 3.444 | 36748 | -- | -- |
| 849.76 | 1.36 | 4.71 | -- | 0.917 | -0.921 | -- | -- | -0.016 | 6.65 | 10.01 | 40324 | -- | -- |
| 318.27 | 0.834 | 4.64 | -4.92 | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
| 934.7 | 1.43 | 4.5 | -- | 0.646 | -- | -- | -- | 0.318 | 7.32 | -- | -- | -- | -- |
| 495.7 | 1.04 | 4.32 | -- | -- | -3.39 | -- | -- | 1.2 | -- | 0.009998 | 46811 | -- | -- |
| 956.84 | 1.44 | 4.52 | -- | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 241.91 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 242.80 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 4 | 243.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 5 | 243.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 6 | 243.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 7 | 243.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 8 | 243.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 9 | 243.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 10 | 243.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 13 | 243.78 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 16 | 243.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 18 | 243.88 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 20 | 243.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 12 |
| 23 | 243.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 26 | 244.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 27 | 244.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 28 | 244.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 36 | 244.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 37 | 244.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 65 | 244.47 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 86 | 244.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 87 | 244.92 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 89 | 244.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 113 | 245.07 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 123 | 245.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 148 | 245.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 159 | 245.32 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 177 | 245.44 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 7 | NA |
| 179 | 245.44 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 180 | 245.45 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 7 | NA |
| 181 | 245.45 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 188 | 245.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 189 | 245.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 190 | 245.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 204 | 245.76 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 228 | 245.92 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 281 | 246.37 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 300 | 246.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 369 | 246.90 | humidity | 90.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 411 | 247.03 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 414 | 247.05 | humidity | 90.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 433 | 247.19 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 453 | 247.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 491 | 247.55 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 591 | 247.82 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 607 | 247.95 | radiation | 1.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 622 | 248.01 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 623 | 248.02 | radiation | 1.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 640 | 248.09 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 668 | 248.20 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 678 | 248.24 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 699 | 248.34 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 703 | 248.34 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 761 | 248.54 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 796 | 248.61 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 797 | 248.61 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 820 | 248.67 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 895 | 248.90 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 897 | 248.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 901 | 248.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 922 | 248.96 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 923 | 248.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 933 | 248.97 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 936 | 248.97 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 938 | 248.97 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 944 | 248.98 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 952 | 248.99 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 14 | 21 |
| 961 | 249.01 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 975 | 249.03 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 993 | 249.04 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 17 |