Os03g0290500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Synaptojanin, N-terminal domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0290500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Synaptojanin, N-terminal domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.51 | 0.303 | 8.14 | -0.683 | 1.17 | -1.1 | 0.317 | 0.126 | 0.0878 | 6.4 | 19.19 | 114 | -- | -- |
| 41.51 | 0.3 | 8.14 | -0.703 | 1.17 | -1.1 | 0.29 | -- | 0.0811 | 6.37 | 18.97 | 122 | -- | -- |
| 41.7 | 0.301 | 8.14 | -0.71 | 1.17 | -1.1 | -- | -0.0643 | 0.076 | 6.33 | 18.97 | 126 | -- | -- |
| 41.7 | 0.301 | 8.14 | -0.706 | 1.17 | -1.1 | -- | -- | 0.0782 | 6.33 | 19 | 126 | -- | -- |
| 83.79 | 0.426 | 8.14 | -0.414 | -- | -1.86 | -- | 1.1 | 0.18 | -- | 23.8 | 327 | -- | -- |
| 59.52 | 0.362 | 8.18 | -0.952 | 1.49 | -- | 0.34 | -- | -0.104 | 5.66 | -- | -- | -- | -- |
| 59.8 | 0.362 | 8.18 | -0.95 | 1.49 | -- | -- | -- | -0.105 | 5.63 | -- | -- | -- | -- |
| 84.34 | 0.428 | 8.16 | -0.588 | -- | -1.78 | -- | -- | 0.134 | -- | 23.75 | 326 | -- | -- |
| 53.09 | 0.339 | 8.12 | -- | 1.09 | -1.39 | -- | -- | 0.187 | 6.58 | 17.69 | 154 | -- | -- |
| 174.63 | 0.617 | 8.2 | -0.903 | -- | -- | -- | -- | -0.0694 | -- | -- | -- | -- | -- |
| 83.6 | 0.428 | 8.16 | -- | 1.47 | -- | -- | -- | 0.000736 | 5.66 | -- | -- | -- | -- |
| 93.03 | 0.449 | 8.14 | -- | -- | -1.87 | -- | -- | 0.23 | -- | 23.35 | 324 | -- | -- |
| 196.12 | 0.654 | 8.18 | -- | -- | -- | -- | -- | 0.0307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.28 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 26 | 39.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 71 | 40.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 80 | 40.97 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 100 | 41.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 110 | 41.49 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 122 | 41.74 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 131 | 41.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 148 | 42.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 159 | 42.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 180 | 42.45 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 229 | 42.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 242 | 42.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 303 | 43.35 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 306 | 43.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 351 | 43.61 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 19 |
| 367 | 43.72 | radiation | 10 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 408 | 43.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 419 | 43.90 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 19 |
| 429 | 43.93 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 21 |
| 443 | 43.98 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 17 |
| 472 | 44.06 | radiation | 20 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 488 | 44.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 503 | 44.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 513 | 44.21 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 531 | 44.26 | temperature | 25 | 720 | > th | dose independent | rect. | 22 | 22 |
| 534 | 44.27 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 554 | 44.31 | radiation | 20 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 560 | 44.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 563 | 44.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 680 | 44.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 704 | 44.63 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 811 | 44.79 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 22 |
| 834 | 44.82 | radiation | 20 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 835 | 44.83 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 21 |
| 877 | 44.87 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 23 |
| 881 | 44.88 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 17 |
| 912 | 44.92 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 945 | 44.96 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 23 |
| 952 | 44.97 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 20 |
| 979 | 45.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 993 | 45.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |