Os03g0289800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Leucoanthocyanidin dioxygenase-like protein.
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Os03g0289800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Leucoanthocyanidin dioxygenase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 594.93 | 1.15 | 4.18 | 0.704 | 0.405 | -5.47 | 0.503 | -0.902 | 1.22 | 5.1 | 8.619 | 663 | -- | -- |
| 594.96 | 1.14 | 4.18 | 0.691 | 0.406 | -5.27 | 0.495 | -- | 1.22 | 5.09 | 8.6 | 662 | -- | -- |
| 595.53 | 1.14 | 4.18 | 0.702 | 0.408 | -5.44 | -- | -0.677 | 1.21 | 4.89 | 8.623 | 663 | -- | -- |
| 595.55 | 1.14 | 4.18 | 0.694 | 0.407 | -5.29 | -- | -- | 1.21 | 4.88 | 8.606 | 663 | -- | -- |
| 604.27 | 1.14 | 4.19 | 0.722 | -- | -5.45 | -- | -1.19 | 1.22 | -- | 8.684 | 664 | -- | -- |
| 724.2 | 1.26 | 4.23 | 0.204 | 0.34 | -- | 0.615 | -- | 1.01 | 4.07 | -- | -- | -- | -- |
| 724.33 | 1.26 | 4.23 | 0.195 | 0.356 | -- | -- | -- | 1.01 | 2.7 | -- | -- | -- | -- |
| 601.29 | 1.14 | 4.18 | 0.75 | -- | -5.02 | -- | -- | 1.23 | -- | 8.8 | 840 | -- | -- |
| 607.34 | 1.15 | 4.21 | -- | 0.468 | -5.14 | -- | -- | 1.11 | 4.66 | 8.7 | 614 | -- | -- |
| 731.71 | 1.26 | 4.23 | 0.21 | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
| 725.34 | 1.26 | 4.24 | -- | 0.36 | -- | -- | -- | 0.985 | 2.71 | -- | -- | -- | -- |
| 614.51 | 1.15 | 4.2 | -- | -- | -4.64 | -- | -- | 1.14 | -- | 8.753 | 832 | -- | -- |
| 732.88 | 1.26 | 4.24 | -- | -- | -- | -- | -- | 0.993 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 592.76 | radiation | 1 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 2 | 593.59 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 7 | 594.47 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 9 | 595.13 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 15 | 596.27 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 22 |
| 17 | 596.27 | wind | 7 | 270 | > th | dose dependent | sin | 12 | NA |
| 21 | 596.62 | wind | 9 | 270 | < th | dose independent | sin | 11 | NA |
| 22 | 596.66 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 23 | 596.74 | wind | 9 | 270 | > th | dose independent | sin | 11 | NA |
| 25 | 596.90 | wind | 7 | 720 | > th | dose dependent | rect. | 10 | 16 |
| 26 | 596.92 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 37 | 597.22 | wind | 7 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 57 | 597.35 | wind | 7 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 77 | 597.54 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 101 | 597.92 | wind | 7 | 720 | > th | dose dependent | no | NA | NA |
| 117 | 598.09 | wind | 7 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 120 | 598.18 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 132 | 598.36 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 15 |
| 143 | 598.47 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 151 | 598.64 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 12 |
| 154 | 598.65 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 175 | 598.84 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 5 |
| 187 | 598.97 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 203 | 598.97 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 22 |
| 230 | 599.25 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 23 |
| 281 | 599.74 | wind | 9 | 720 | < th | dose independent | sin | 21 | NA |
| 298 | 599.92 | wind | 7 | 720 | > th | dose dependent | sin | 20 | NA |
| 341 | 600.24 | wind | 9 | 720 | > th | dose independent | sin | 21 | NA |
| 433 | 601.61 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 482 | 602.38 | wind | 9 | 720 | < th | dose independent | sin | 18 | NA |
| 618 | 604.12 | wind | 7 | 720 | < th | dose independent | rect. | 17 | 23 |
| 627 | 604.32 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 16 |
| 704 | 606.75 | wind | 9 | 720 | < th | dose independent | rect. | 4 | 16 |
| 767 | 608.02 | wind | 7 | 720 | < th | dose independent | rect. | 2 | 23 |
| 813 | 608.79 | wind | 7 | 720 | < th | dose independent | rect. | 7 | 23 |
| 827 | 609.02 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 15 |
| 878 | 610.13 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 23 |
| 922 | 610.75 | wind | 7 | 720 | < th | dose independent | rect. | 12 | 23 |
| 928 | 610.97 | wind | 7 | 720 | < th | dose independent | rect. | 21 | 23 |
| 988 | 611.79 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |