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Os03g0285800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MAP Kinase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.03) R2 : 0.431
β1 : -0.827 (0.111) R2dD : 0.0735 R2D : 0.0342
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.09 (0.0641) R2dE : 0.394 R2E : 0.356
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0354 (0.0647) R2dN8 : -0.000239 R2N8 : 0.00523
σ : 0.559
deviance : 144.23
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 19.42
memory length : 357
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 14.2
open length of G : 15.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
134.03 0.544 10.7 -0.794 0.669 1.02 -0.562 0.262 -0.00164 5.29 19.6 285 12 18
133 0.537 10.7 -0.822 0.634 1.11 -0.774 -- 0.00843 6.1 19.6 320 12.4 16.9
134.17 0.539 10.7 -0.786 0.693 1.04 -- 0.297 0.0174 5.44 19.5 295 12 17.5
134.31 0.54 10.7 -0.845 0.665 1.06 -- -- -0.00241 5.41 19.59 318 12 17.4
145.37 0.562 10.7 -0.741 -- 1 -- 0.267 0.0779 -- 19.3 346 13.9 16.3
168.47 0.608 10.7 -0.561 1.07 -- 0.684 -- 0.177 1.57 -- -- -- --
170.28 0.611 10.7 -0.584 1.07 -- -- -- 0.173 1.69 -- -- -- --
144.23 0.559 10.7 -0.827 -- 1.09 -- -- 0.0354 -- 19.42 357 14.2 15.9
152.46 0.575 10.7 -- 0.646 0.89 -- -- 0.107 4.74 19.6 302 12.3 17.3
240.48 0.725 10.7 -0.541 -- -- -- -- 0.197 -- -- -- -- --
179.29 0.626 10.7 -- 1.06 -- -- -- 0.238 1.67 -- -- -- --
162.59 0.594 10.7 -- -- 1.05 -- -- 0.072 -- 19.3 344 14.2 15.8
248.2 0.735 10.6 -- -- -- -- -- 0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.58 temperature 20.0 270 > th dose independent rect. 12 18
5 137.62 temperature 20.0 270 > th dose independent rect. 23 7
13 138.97 temperature 20.0 270 > th dose independent rect. 1 4
18 139.80 radiation 40.0 14400 < th dose dependent rect. 21 8
25 140.81 humidity 70.0 90 > th dose dependent rect. 1 8
27 140.99 temperature 20.0 10 > th dose independent rect. 1 7
38 141.43 humidity 80.0 90 > th dose dependent rect. 1 19
40 141.45 wind 7.0 270 < th dose independent rect. 17 8
42 141.53 temperature 10.0 270 > th dose dependent rect. 1 5
44 141.64 temperature 10.0 270 > th dose dependent rect. 24 7
50 141.75 radiation 1.0 270 < th dose independent rect. 1 17
84 142.43 temperature 20.0 270 > th dose independent rect. 1 17
85 142.45 precipitation 0.1 270 < th dose independent rect. 6 19
87 142.45 precipitation 0.1 270 < th dose dependent rect. 6 19
96 142.58 radiation 10.0 270 < th dose independent rect. 24 7
98 142.59 precipitation 0.1 270 < th dose independent rect. 7 17
99 142.59 precipitation 0.1 270 < th dose dependent rect. 7 17
113 142.78 wind 7.0 270 < th dose independent rect. 20 15
116 142.81 humidity 80.0 270 > th dose independent rect. 24 7
120 142.86 humidity 80.0 270 > th dose independent rect. 1 5
122 142.89 radiation 10.0 270 < th dose dependent rect. 1 17
123 142.90 radiation 1.0 4320 < th dose independent rect. 21 8
137 143.06 wind 7.0 270 < th dose independent rect. 7 17
138 143.06 radiation 10.0 270 < th dose dependent rect. 1 6
144 143.15 wind 7.0 270 < th dose independent rect. 6 19
203 143.71 radiation 1.0 270 > th dose independent rect. 17 21
235 144.05 radiation 1.0 270 < th dose independent rect. 1 13
239 144.08 radiation 10.0 270 < th dose dependent rect. 1 13
261 144.20 humidity 80.0 30 > th dose independent rect. 2 18
276 144.31 precipitation 0.1 270 < th dose independent rect. 17 8
278 144.31 precipitation 0.1 270 < th dose dependent rect. 17 8
282 144.34 humidity 50.0 30 > th dose dependent sin 6 NA
284 144.37 temperature 10.0 270 > th dose independent rect. 1 5
286 144.37 temperature 30.0 270 < th dose independent rect. 1 5
287 144.37 humidity 50.0 270 > th dose independent rect. 1 5
290 144.37 atmosphere 995.0 270 > th dose independent rect. 1 5
291 144.37 atmosphere 1015.0 270 < th dose independent rect. 1 5
295 144.37 temperature 10.0 270 > th dose independent rect. 6 19
299 144.38 wind 9.0 270 < th dose dependent rect. 17 8
300 144.40 wind 9.0 270 < th dose independent rect. 1 5
314 144.46 humidity 50.0 10 > th dose dependent rect. 2 18
316 144.47 temperature 30.0 270 < th dose independent rect. 24 7
317 144.47 humidity 50.0 270 > th dose independent rect. 24 7
319 144.47 atmosphere 995.0 270 > th dose independent rect. 24 7
320 144.47 atmosphere 1015.0 270 < th dose independent rect. 24 7
323 144.47 temperature 10.0 270 > th dose independent rect. 7 17
330 144.51 wind 9.0 270 < th dose independent rect. 24 7
369 144.59 humidity 90.0 270 > th dose independent rect. 3 1
381 144.68 radiation 1.0 270 < th dose independent sin 4 NA
390 144.74 precipitation 0.1 270 < th dose independent rect. 5 9
391 144.74 precipitation 0.1 270 < th dose dependent rect. 5 9
392 144.76 precipitation 0.1 270 < th dose independent rect. 1 5
394 144.76 precipitation 0.1 270 < th dose dependent rect. 1 5
415 144.85 precipitation 0.1 270 < th dose independent rect. 24 7
416 144.85 precipitation 0.1 270 < th dose dependent rect. 24 7
418 144.87 radiation 1.0 270 < th dose independent rect. 23 20
424 144.90 temperature 20.0 270 > th dose independent rect. 11 9
439 144.94 humidity 80.0 90 > th dose dependent rect. 1 14
455 145.00 humidity 70.0 30 > th dose dependent sin 5 NA
459 145.01 temperature 10.0 270 > th dose independent rect. 5 9
460 145.01 atmosphere 995.0 270 > th dose independent rect. 5 9
461 145.01 atmosphere 1015.0 270 < th dose independent rect. 5 9
475 145.04 radiation 1.0 270 > th dose independent sin 4 NA
523 145.19 wind 9.0 270 < th dose dependent rect. 6 7
525 145.20 temperature 10.0 43200 > th dose independent rect. 10 3
526 145.20 radiation 1.0 270 > th dose independent rect. 6 7
531 145.22 wind 9.0 270 < th dose independent rect. 5 9
537 145.24 temperature 10.0 270 > th dose independent rect. 18 7
538 145.24 humidity 50.0 270 > th dose independent rect. 18 7
539 145.24 radiation 20.0 270 < th dose independent rect. 18 7
542 145.24 wind 1.0 270 > th dose independent rect. 11 9
543 145.24 temperature 10.0 270 > th dose independent rect. 1 17
544 145.24 atmosphere 1015.0 270 < th dose independent rect. 1 17
551 145.25 radiation 1.0 270 > th dose independent rect. 4 10
561 145.25 humidity 80.0 270 > th dose dependent rect. 3 1
566 145.26 radiation 30.0 270 < th dose dependent rect. 18 7
594 145.29 wind 9.0 270 < th dose dependent rect. 7 17
624 145.36 precipitation 0.1 270 < th dose independent rect. 20 15
627 145.36 precipitation 0.1 270 < th dose dependent rect. 20 15
651 145.44 atmosphere 1015.0 270 < th dose independent rect. 11 9
652 145.44 temperature 10.0 270 > th dose independent rect. 20 15
653 145.44 atmosphere 995.0 270 > th dose independent rect. 20 15
660 145.46 precipitation 0.1 270 < th dose independent rect. 4 23
664 145.46 precipitation 0.1 270 < th dose dependent rect. 4 23
675 145.49 wind 5.0 10 < th dose independent rect. 20 7
701 145.59 radiation 1.0 270 < th dose dependent sin 4 NA
705 145.61 humidity 90.0 90 < th dose independent sin 3 NA
742 145.69 wind 9.0 270 < th dose independent rect. 1 17
780 145.77 atmosphere 995.0 270 > th dose independent rect. 18 7
798 145.82 temperature 10.0 43200 > th dose independent rect. 10 5
825 145.86 radiation 40.0 14400 < th dose dependent rect. 19 10
845 145.90 radiation 40.0 10 < th dose dependent rect. 13 19
878 146.01 wind 5.0 270 < th dose independent rect. 6 7
895 146.05 wind 9.0 270 < th dose independent rect. 11 9
963 146.20 radiation 40.0 270 < th dose independent rect. 13 16
978 146.22 temperature 10.0 10 > th dose dependent rect. 1 7