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Os03g0285300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.01 (0.0616) R2 : 0.4
β1 : 1.48 (0.248) R2dD : 0.0622 R2D : -0.071
β2 : 1.62 (0.146) R2dC : 0.167 R2C : 0.124
β3 : 2.82 (0.265) R2dE : 0.199 R2E : 0.12
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.864 (0.134) R2dN8 : 0.0763 R2N8 : 0.1
σ : 1.14
deviance : 601.78
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C
peak time of C : 23.2
E
wheather : humidity
threshold : 50.11
memory length : 4369
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
587.95 1.14 8.95 1.81 1.67 3.75 1.38 -2.81 0.8 23.1 50.01 4376 -- --
595.76 1.14 9 1.61 1.76 3.01 1.74 -- 0.848 22.9 50 4268 -- --
595.86 1.14 8.96 1.75 1.66 3.77 -- -2.91 0.79 23.2 50 4376 -- --
601.78 1.14 9.01 1.48 1.62 2.82 -- -- 0.864 23.2 50.11 4369 -- --
765.24 1.29 8.98 1.54 -- 3.5 -- -1.52 0.842 -- 50 4468 -- --
745.36 1.28 8.94 0.41 1.51 -- 1.14 -- 1.2 22.9 -- -- -- --
750.64 1.28 8.94 0.362 1.5 -- -- -- 1.19 23 -- -- -- --
765.13 1.29 8.97 1.42 -- 2.7 -- -- 0.901 -- 51 4438 -- --
643.08 1.18 9.06 -- 1.61 2.68 -- -- 0.668 22.9 52.09 4612 -- --
891.02 1.39 8.9 0.397 -- -- -- -- 1.2 -- -- -- -- --
754.1 1.28 8.95 -- 1.5 -- -- -- 1.15 23.1 -- -- -- --
794.61 1.31 9.01 -- -- 1.95 -- -- 0.726 -- 52.3 4477 -- --
895.17 1.4 8.91 -- -- -- -- -- 1.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 571.40 wind 9 43200 > th dose dependent rect. 15 1
2 573.17 wind 9 43200 > th dose independent rect. 10 4
3 574.82 wind 9 43200 < th dose independent rect. 15 1
4 575.19 wind 9 43200 > th dose independent rect. 15 1
7 578.49 wind 9 43200 > th dose independent rect. 10 7
13 584.43 wind 9 43200 < th dose independent rect. 10 4
15 584.56 wind 9 43200 > th dose dependent rect. 11 6
21 585.10 wind 9 43200 < th dose independent rect. 9 8
23 585.27 wind 9 43200 > th dose independent rect. 13 4
24 585.29 radiation 30 43200 < th dose independent rect. 11 1
31 586.33 wind 9 43200 > th dose independent rect. 12 8
40 587.73 humidity 50 4320 > th dose independent rect. 13 23
41 587.84 radiation 30 43200 > th dose independent rect. 11 1
44 588.36 humidity 50 4320 > th dose independent rect. 2 21
45 588.37 humidity 50 4320 > th dose independent rect. 2 16
46 588.42 humidity 50 4320 > th dose independent rect. 2 19
50 588.46 humidity 50 4320 > th dose independent rect. 9 22
73 588.73 humidity 50 4320 > th dose independent rect. 9 14
77 588.73 humidity 50 4320 > th dose independent rect. 19 23
78 588.74 humidity 50 4320 > th dose independent rect. 9 9
86 588.80 humidity 50 4320 > th dose independent rect. 9 12
88 588.81 humidity 50 4320 > th dose independent rect. 22 20
96 588.86 humidity 50 4320 > th dose independent rect. 22 23
97 588.88 humidity 50 4320 > th dose independent no NA NA
105 588.91 humidity 50 4320 > th dose independent rect. 6 23
116 588.97 humidity 50 4320 > th dose independent rect. 4 23
161 589.22 wind 9 43200 < th dose independent rect. 13 7
176 589.36 wind 9 43200 > th dose independent rect. 5 12
184 589.46 humidity 50 4320 > th dose independent sin 22 NA
197 589.85 wind 9 43200 < th dose independent rect. 13 4
205 590.20 wind 9 43200 > th dose independent sin 22 NA
249 590.89 humidity 50 4320 > th dose independent rect. 16 23
279 592.02 wind 9 43200 > th dose dependent rect. 10 9
283 592.16 wind 1 14400 < th dose dependent rect. 12 1
302 593.00 radiation 20 43200 > th dose dependent rect. 11 1
310 593.41 wind 9 43200 < th dose independent rect. 15 5
311 593.45 wind 9 43200 > th dose independent rect. 15 5
314 593.52 wind 9 43200 > th dose independent rect. 11 21
317 593.61 wind 9 43200 < th dose independent rect. 5 12
339 594.62 humidity 50 4320 < th dose independent rect. 13 23
340 594.69 humidity 50 4320 < th dose independent rect. 16 23
343 594.79 wind 9 43200 < th dose independent rect. 4 15
352 594.97 wind 9 43200 > th dose dependent rect. 10 4
370 595.58 wind 9 43200 < th dose independent sin 22 NA
386 595.90 humidity 50 4320 < th dose dependent rect. 15 21
402 596.49 humidity 50 4320 < th dose independent no NA NA
403 596.49 humidity 50 4320 < th dose independent rect. 9 9
549 596.73 wind 9 43200 > th dose independent rect. 10 14
561 597.10 humidity 50 4320 < th dose independent sin 23 NA
563 597.11 wind 9 43200 > th dose dependent rect. 11 20
697 599.48 radiation 40 43200 > th dose independent rect. 13 1
699 599.51 wind 9 43200 < th dose independent rect. 13 19
710 599.66 wind 9 43200 < th dose independent rect. 11 21
736 600.27 wind 9 43200 > th dose independent rect. 15 23
751 600.61 radiation 30 43200 < th dose independent rect. 4 8
752 600.61 radiation 30 43200 < th dose independent rect. 2 10
757 600.62 radiation 30 43200 < th dose independent rect. 18 18
760 600.63 radiation 30 43200 < th dose independent rect. 22 14
827 601.44 humidity 60 4320 < th dose dependent sin 11 NA
828 601.46 wind 9 43200 > th dose independent rect. 18 23
880 601.88 wind 3 43200 > th dose independent rect. 1 2
928 602.12 radiation 40 43200 > th dose independent rect. 10 22
984 602.50 wind 1 14400 < th dose dependent rect. 24 2