Os03g0281900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os03g0281900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 611.4 | 1.16 | 4.03 | 1.69 | 0.0694 | 2.3 | -1.93 | 7.33 | 0.721 | 7.53 | 14.12 | 30288 | 10.9 | 0.9 |
| 634.21 | 1.17 | 4.02 | 1.72 | 0.0479 | 2.44 | -1.67 | -- | 0.754 | 7.43 | 12.97 | 30118 | 11.3 | 1.36 |
| 615.7 | 1.16 | 4.03 | 1.68 | 0.0867 | 2.38 | -- | 7.36 | 0.729 | 6.9 | 15.27 | 30160 | 10.9 | 1.27 |
| 640.73 | 1.18 | 4 | 1.64 | 0.0272 | 2.65 | -- | -- | 0.834 | 6.43 | 12.97 | 30121 | 11.3 | 1.27 |
| 616.03 | 1.16 | 4.02 | 1.59 | -- | 2.45 | -- | 7.34 | 0.744 | -- | 15.58 | 30162 | 10.9 | 1.4 |
| 804.19 | 1.33 | 4 | 1.36 | 0.11 | -- | -1.94 | -- | 0.466 | 7.24 | -- | -- | -- | -- |
| 813.78 | 1.34 | 4 | 1.31 | 0.144 | -- | -- | -- | 0.468 | 4.65 | -- | -- | -- | -- |
| 640.25 | 1.18 | 4 | 1.81 | -- | 2.67 | -- | -- | 0.837 | -- | 12.98 | 30120 | 11.3 | 1.28 |
| 669.44 | 1.21 | 3.9 | -- | 0.0759 | 2.5 | -- | -- | 0.805 | 6.33 | 27.27 | 35857 | 11.7 | 1.71 |
| 814.88 | 1.33 | 4 | 1.32 | -- | -- | -- | -- | 0.472 | -- | -- | -- | -- | -- |
| 859.08 | 1.37 | 4.03 | -- | 0.169 | -- | -- | -- | 0.322 | 4.44 | -- | -- | -- | -- |
| 649.49 | 1.19 | 3.92 | -- | -- | 2.65 | -- | -- | 0.765 | -- | 23.13 | 47520 | 11.7 | 1.57 |
| 860.61 | 1.37 | 4.03 | -- | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 598.28 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 2 | 600.05 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 3 | 602.01 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 4 | 602.03 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 6 | 602.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 8 | 602.79 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 13 | 604.65 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 16 | 605.23 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 17 | 605.52 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 19 | 606.08 | radiation | 30 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 43 | 607.13 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 45 | 607.19 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 47 | 607.74 | radiation | 40 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 68 | 607.97 | radiation | 1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 69 | 607.99 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 73 | 608.12 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 83 | 608.88 | radiation | 40 | 43200 | > th | dose independent | sin | 15 | NA |
| 116 | 609.75 | temperature | 25 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 118 | 609.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 120 | 609.96 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 121 | 609.96 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 122 | 609.96 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 136 | 610.51 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 162 | 610.66 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 181 | 610.75 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 221 | 611.20 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 268 | 611.58 | temperature | 30 | 43200 | < th | dose independent | sin | 11 | NA |
| 269 | 611.58 | radiation | 40 | 43200 | < th | dose dependent | sin | 17 | NA |
| 282 | 611.62 | temperature | 30 | 43200 | > th | dose independent | sin | 11 | NA |
| 287 | 611.68 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 305 | 611.75 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 311 | 611.81 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 315 | 611.83 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 330 | 611.96 | temperature | 30 | 43200 | > th | dose dependent | sin | 10 | NA |
| 331 | 611.97 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 333 | 611.99 | temperature | 30 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 344 | 612.10 | temperature | 30 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 346 | 612.11 | radiation | 20 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 351 | 612.18 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 367 | 612.33 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 376 | 612.40 | radiation | 1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 378 | 612.40 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 398 | 612.53 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 488 | 613.01 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 864 | 614.62 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 5 | 1 |