Os03g0277600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (clone wusl1032) mRNA sequence.
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Os03g0277600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to (clone wusl1032) mRNA sequence.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 749.39 | 1.29 | 4.82 | -2 | 2.4 | 1.01 | -1.13 | -11.6 | 0.0455 | 0.955 | 7.014 | 2713 | 17.1 | 2.15 |
| 789.31 | 1.31 | 5 | -1.66 | 2.19 | 3.84 | -1.89 | -- | 0.0218 | 1.1 | 7.1 | 2500 | 16.8 | 1.6 |
| 744.1 | 1.27 | 4.82 | -1.89 | 2.4 | 1.15 | -- | -11.9 | 0.0743 | 0.908 | 7.073 | 2781 | 17.1 | 1.43 |
| 795.35 | 1.31 | 5 | -1.5 | 2.17 | 3.83 | -- | -- | 0.0228 | 1.08 | 7.1 | 2502 | 16.8 | 2.33 |
| 1087.89 | 1.54 | 4.79 | -1.62 | -- | 1.69 | -- | -12.1 | 0.137 | -- | 6.998 | 2428 | 17.1 | 1.5 |
| 1056.7 | 1.52 | 5.17 | -2.84 | 2.61 | -- | -2.34 | -- | -0.542 | 1.08 | -- | -- | -- | -- |
| 1079.27 | 1.54 | 5.16 | -2.75 | 2.62 | -- | -- | -- | -0.528 | 0.978 | -- | -- | -- | -- |
| 1110.82 | 1.55 | 4.98 | -1.2 | -- | 4.47 | -- | -- | -0.0106 | -- | 7.1 | 2445 | 16.8 | 2.45 |
| 826.5 | 1.34 | 5.03 | -- | 2.41 | 4.56 | -- | -- | 0.228 | 1.01 | 7.2 | 2966 | 17.1 | 2.35 |
| 1504.96 | 1.81 | 5.12 | -2.65 | -- | -- | -- | -- | -0.478 | -- | -- | -- | -- | -- |
| 1278.84 | 1.67 | 5.09 | -- | 2.57 | -- | -- | -- | -0.222 | 0.933 | -- | -- | -- | -- |
| 1130.33 | 1.57 | 4.97 | -- | -- | 5.09 | -- | -- | 0.201 | -- | 7.091 | 2446 | 16.8 | 2.47 |
| 1690.74 | 1.92 | 5.05 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 789.46 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 4 | 796.39 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 10 | 801.94 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 11 | 802.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 12 | 802.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 23 | 808.11 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 24 | 808.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 29 | 810.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 52 | 815.45 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 55 | 816.37 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 83 | 821.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 113 | 826.56 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 116 | 826.76 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 131 | 828.57 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 133 | 828.80 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 147 | 830.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 177 | 834.06 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 197 | 836.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 199 | 836.67 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 208 | 837.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 210 | 837.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 242 | 839.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 245 | 839.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 282 | 841.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 283 | 841.06 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 288 | 841.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 323 | 842.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 341 | 842.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 384 | 842.75 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 398 | 842.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 401 | 843.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 17 |
| 422 | 843.51 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 429 | 843.79 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 459 | 844.34 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 460 | 844.35 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 556 | 846.47 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 592 | 847.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 627 | 849.63 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 710 | 850.29 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 712 | 850.29 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 714 | 850.29 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 766 | 850.29 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 768 | 850.29 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 770 | 850.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 851 | 851.66 | wind | 5 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 900 | 853.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 6 | 18 |