Os03g0277300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock protein 70.
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Os03g0277300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock protein 70.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.78 | 0.743 | 7.33 | 3.43 | 3.93 | 2.93 | 0.457 | 0.29 | 0.407 | 7.77 | 19.94 | 10 | -- | -- |
| 249.84 | 0.736 | 7.34 | 3.38 | 3.93 | 2.94 | 0.474 | -- | 0.394 | 7.77 | 20.07 | 9 | -- | -- |
| 250.37 | 0.737 | 7.33 | 3.46 | 3.93 | 2.92 | -- | 0.392 | 0.413 | 7.77 | 19.93 | 9 | -- | -- |
| 250.49 | 0.737 | 7.34 | 3.4 | 3.93 | 2.93 | -- | -- | 0.395 | 7.77 | 20.1 | 9 | -- | -- |
| 1074.75 | 1.54 | 7.42 | 3.51 | -- | 2.91 | -- | 0.44 | 0.497 | -- | 17.9 | 4 | -- | -- |
| 377.86 | 0.911 | 7.22 | 4 | 3.9 | -- | 0.426 | -- | 0.897 | 8.84 | -- | -- | -- | -- |
| 378.47 | 0.911 | 7.22 | 4.02 | 3.9 | -- | -- | -- | 0.897 | 8.83 | -- | -- | -- | -- |
| 1074.07 | 1.53 | 7.43 | 3.45 | -- | 2.81 | -- | -- | 0.477 | -- | 18.5 | 3 | -- | -- |
| 348.97 | 0.87 | 7.55 | -- | 3.93 | 3.43 | -- | -- | -0.575 | 8.89 | 7.872 | 47520 | -- | -- |
| 1242.49 | 1.65 | 7.33 | 4.02 | -- | -- | -- | -- | 0.926 | -- | -- | -- | -- | -- |
| 803.46 | 1.33 | 7.32 | -- | 3.91 | -- | -- | -- | 0.45 | 8.75 | -- | -- | -- | -- |
| 1230.57 | 1.63 | 7.65 | -- | -- | 3.36 | -- | -- | -0.527 | -- | 6.072 | 47520 | -- | -- |
| 1668.37 | 1.91 | 7.43 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 22 |
| 17 | 244.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 18 | 244.26 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 42 | 248.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 47 | 249.16 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 52 | 249.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 53 | 249.82 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 75 | 252.48 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 86 | 253.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 94 | 254.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 117 | 255.99 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 154 | 258.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 157 | 258.97 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 164 | 259.58 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 168 | 259.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 189 | 260.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 197 | 261.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 232 | 262.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 292 | 265.32 | temperature | 30 | 10 | < th | dose dependent | sin | 4 | NA |
| 316 | 266.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 368 | 267.43 | temperature | 25 | 10 | > th | dose independent | rect. | 23 | 20 |
| 373 | 267.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 380 | 267.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 396 | 268.16 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 428 | 269.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 441 | 269.54 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 443 | 269.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 451 | 269.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 466 | 269.98 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 507 | 271.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 511 | 271.20 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 512 | 271.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 515 | 271.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 520 | 271.47 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 521 | 271.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 537 | 271.70 | temperature | 25 | 1440 | > th | dose independent | rect. | 4 | 21 |
| 558 | 272.04 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 21 |
| 698 | 273.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 711 | 273.78 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 721 | 273.88 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 13 |
| 723 | 273.90 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 755 | 274.19 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 791 | 274.50 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 793 | 274.51 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 794 | 274.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 812 | 274.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 829 | 274.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 859 | 275.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 862 | 275.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 891 | 275.31 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 932 | 275.62 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 975 | 275.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 5 |