Os03g0277100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os03g0277100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.11 | 0.402 | 12.3 | 0.049 | 1.68 | -0.646 | 0.75 | 0.282 | 0.218 | 7.63 | 10.01 | 117 | -- | -- |
| 73.46 | 0.399 | 12.3 | 0.0454 | 1.67 | -0.638 | 0.856 | -- | 0.209 | 7.64 | 10.01 | 117 | -- | -- |
| 74.51 | 0.402 | 12.3 | 0.0563 | 1.69 | -0.645 | -- | 0.474 | 0.216 | 7.6 | 10.02 | 119 | -- | -- |
| 75.66 | 0.405 | 12.3 | 0.0643 | 1.67 | -0.624 | -- | -- | 0.213 | 7.58 | 10.01 | 119 | -- | -- |
| 98.84 | 0.463 | 12.4 | 0.727 | -- | -1.59 | -- | 0.045 | 0.183 | -- | 0.04 | 744 | -- | -- |
| 84.39 | 0.431 | 12.3 | -0.03 | 1.69 | -- | 0.681 | -- | 0.168 | 6.21 | -- | -- | -- | -- |
| 85.52 | 0.433 | 12.3 | -0.023 | 1.69 | -- | -- | -- | 0.166 | 6.17 | -- | -- | -- | -- |
| 76.83 | 0.408 | 12.3 | 0.224 | -- | -2.1 | -- | -- | 0.245 | -- | 0.5902 | 759 | -- | -- |
| 75.76 | 0.405 | 12.3 | -- | 1.67 | -0.618 | -- | -- | 0.205 | 7.57 | 10.01 | 117 | -- | -- |
| 233.9 | 0.715 | 12.3 | 0.0241 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 85.53 | 0.433 | 12.3 | -- | 1.69 | -- | -- | -- | 0.168 | 6.18 | -- | -- | -- | -- |
| 76.5 | 0.407 | 12.3 | -- | -- | -2.25 | -- | -- | 0.232 | -- | 1.13 | 778 | -- | -- |
| 233.91 | 0.714 | 12.3 | -- | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.98 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 2 | 62.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 3 | 62.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 4 | 62.32 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 10 | 63.79 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 15 | 63.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 17 | 63.99 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 21 | 64.09 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 25 | 64.29 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 32 | 64.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 33 | 64.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 35 | 64.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 61 | 65.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 62 | 65.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 64 | 65.05 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 65 | 65.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 68 | 65.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 69 | 65.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 74 | 65.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 75 | 65.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 77 | 65.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 80 | 65.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 81 | 65.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 89 | 65.37 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 104 | 65.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 111 | 65.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 113 | 65.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 118 | 65.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 136 | 65.86 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 147 | 66.00 | radiation | 30.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 154 | 66.06 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 174 | 66.21 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 198 | 66.33 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 202 | 66.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 205 | 66.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 218 | 66.45 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 220 | 66.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 222 | 66.47 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 223 | 66.47 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 225 | 66.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 226 | 66.47 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 229 | 66.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 20 |
| 231 | 66.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 232 | 66.50 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 233 | 66.51 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 237 | 66.55 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 241 | 66.58 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 243 | 66.58 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 244 | 66.58 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 246 | 66.58 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 247 | 66.58 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 249 | 66.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 4 |
| 251 | 66.59 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 294 | 66.82 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 307 | 66.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 310 | 66.85 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 311 | 66.85 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 312 | 66.85 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 347 | 66.98 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 396 | 67.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 401 | 67.21 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 403 | 67.23 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 420 | 67.24 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 438 | 67.37 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 445 | 67.40 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 498 | 67.68 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 20 |
| 502 | 67.71 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 503 | 67.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 506 | 67.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 508 | 67.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 509 | 67.71 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 510 | 67.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 526 | 67.79 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 529 | 67.81 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 549 | 67.89 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 558 | 67.94 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 603 | 68.08 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 651 | 68.24 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 20 |
| 658 | 68.26 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 687 | 68.34 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 718 | 68.41 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 761 | 68.66 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 803 | 68.76 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 837 | 68.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 903 | 69.06 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 961 | 69.17 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 968 | 69.20 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 970 | 69.20 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 17 |