Os03g0276900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
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Os03g0276900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.53 | 0.395 | 9.09 | -1.81 | 0.309 | 1.02 | -0.63 | -0.861 | -0.359 | 11.5 | 26 | 4606 | -- | -- |
| 70.73 | 0.392 | 9.07 | -1.6 | 0.317 | 0.925 | -0.628 | -- | -0.316 | 11.5 | 26.08 | 4605 | -- | -- |
| 72.08 | 0.395 | 9.09 | -1.83 | 0.321 | 1.01 | -- | -0.839 | -0.358 | 10.8 | 26.1 | 4684 | -- | -- |
| 72.28 | 0.396 | 9.07 | -1.64 | 0.325 | 0.919 | -- | -- | -0.32 | 10.8 | 26.12 | 4709 | -- | -- |
| 78.34 | 0.412 | 9.1 | -1.87 | -- | 1.02 | -- | -0.984 | -0.367 | -- | 26.05 | 4598 | -- | -- |
| 99.03 | 0.467 | 9.06 | -1.3 | 0.268 | -- | -0.732 | -- | -0.307 | 11.8 | -- | -- | -- | -- |
| 101.18 | 0.471 | 9.07 | -1.33 | 0.277 | -- | -- | -- | -0.312 | 11 | -- | -- | -- | -- |
| 78.59 | 0.413 | 9.07 | -1.64 | -- | 0.914 | -- | -- | -0.321 | -- | 26.1 | 4597 | -- | -- |
| 134.98 | 0.541 | 9.01 | -- | 0.344 | 0.557 | -- | -- | -0.0591 | 11.3 | 29.07 | 4992 | -- | -- |
| 105.96 | 0.481 | 9.07 | -1.34 | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
| 148.15 | 0.569 | 9.03 | -- | 0.29 | -- | -- | -- | -0.163 | 11.3 | -- | -- | -- | -- |
| 141.82 | 0.555 | 9.02 | -- | -- | 0.538 | -- | -- | -0.0904 | -- | 28.5 | 4573 | -- | -- |
| 153.41 | 0.578 | 9.04 | -- | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 69.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 4 | 69.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 5 | 69.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 8 | 69.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 13 | 69.88 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 14 | 69.89 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 18 | 69.95 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 22 | 69.98 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 36 | 70.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 39 | 70.19 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 45 | 70.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 52 | 70.31 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 60 | 70.33 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 69 | 70.36 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 96 | 70.47 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 100 | 70.49 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 133 | 70.63 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 19 |
| 152 | 70.65 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 22 |
| 157 | 70.66 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 245 | 70.80 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 260 | 70.85 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 12 |
| 266 | 70.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 292 | 70.91 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 295 | 70.92 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 315 | 70.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 368 | 71.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 379 | 71.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 391 | 71.10 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 425 | 71.16 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 504 | 71.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 505 | 71.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 513 | 71.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 526 | 71.29 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 564 | 71.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 566 | 71.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 580 | 71.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 596 | 71.34 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 600 | 71.34 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 675 | 71.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 797 | 71.53 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 838 | 71.63 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 853 | 71.66 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 856 | 71.67 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 7 |
| 942 | 71.76 | temperature | 30.0 | 1440 | > th | dose independent | sin | 7 | NA |