Os03g0271800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0271800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.21 | 0.708 | 2.87 | 0.379 | 0.0404 | -3.01 | -0.875 | -3.57 | 0.0547 | 3.86 | 9 | 29 | -- | -- |
| 227.71 | 0.703 | 2.86 | 0.365 | 0.0415 | -2.05 | -0.91 | -- | 0.055 | 3.86 | 8.903 | 27 | -- | -- |
| 229.05 | 0.705 | 2.87 | 0.418 | 0.0621 | -2.95 | -- | -4.29 | 0.0551 | 8.16 | 9 | 28 | -- | -- |
| 229.84 | 0.706 | 2.86 | 0.361 | 0.0884 | -1.88 | -- | -- | 0.0575 | 8.42 | 8.996 | 25 | -- | -- |
| 229.39 | 0.705 | 2.87 | 0.387 | -- | -3.09 | -- | -4.53 | 0.0555 | -- | 8.9 | 28 | -- | -- |
| 237.7 | 0.723 | 2.87 | 0.233 | 0.0695 | -- | 0.531 | -- | 0.0145 | 13.9 | -- | -- | -- | -- |
| 238.52 | 0.723 | 2.87 | 0.248 | 0.0955 | -- | -- | -- | 0.0165 | 10.8 | -- | -- | -- | -- |
| 229.55 | 0.706 | 2.86 | 0.398 | -- | -2.1 | -- | -- | 0.071 | -- | 9.101 | 18 | -- | -- |
| 233.14 | 0.711 | 2.87 | -- | 0.0891 | -1.66 | -- | -- | 0.0141 | 8.31 | 8.974 | 26 | -- | -- |
| 239.08 | 0.723 | 2.87 | 0.247 | -- | -- | -- | -- | 0.0159 | -- | -- | -- | -- | -- |
| 240.14 | 0.725 | 2.87 | -- | 0.0937 | -- | -- | -- | -0.0112 | 10.6 | -- | -- | -- | -- |
| 232.22 | 0.71 | 2.87 | -- | -- | -1.96 | -- | -- | 0.0167 | -- | 8.948 | 18 | -- | -- |
| 240.68 | 0.724 | 2.87 | -- | -- | -- | -- | -- | -0.0114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.54 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 215.22 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 3 | 215.46 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 31 | 216.33 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 42 | 217.04 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 1 |
| 43 | 217.29 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 58 | 217.49 | wind | 9.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 60 | 217.84 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 80 | 218.85 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 151 | 220.55 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 3 |
| 153 | 220.56 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 159 | 220.78 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 186 | 220.86 | humidity | 50.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 194 | 221.01 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 3 |
| 210 | 221.17 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 213 | 221.34 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 214 | 221.41 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 225 | 221.64 | wind | 7.0 | 30 | > th | dose independent | rect. | 18 | 4 |
| 261 | 221.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 279 | 222.02 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 303 | 222.07 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 305 | 222.07 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 339 | 222.17 | temperature | 30.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 341 | 222.19 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 405 | 222.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 472 | 222.91 | wind | 1.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 664 | 224.09 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 681 | 224.09 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 809 | 224.49 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 814 | 224.61 | precipitation | 0.1 | 30 | > th | dose independent | sin | 17 | NA |
| 851 | 224.80 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 17 | NA |
| 863 | 224.99 | temperature | 30.0 | 720 | < th | dose independent | sin | 11 | NA |
| 886 | 225.20 | temperature | 30.0 | 720 | > th | dose independent | sin | 11 | NA |
| 889 | 225.25 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 968 | 225.78 | precipitation | 0.1 | 30 | < th | dose independent | sin | 15 | NA |
| 970 | 225.78 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 15 | NA |