Os03g0271500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0271500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.39 | 0.48 | 11.2 | -1.5 | 0.995 | -1.88 | 0.0367 | -3.66 | -1.26 | 20.8 | 0.7004 | 1423 | -- | -- |
| 111.84 | 0.493 | 11.2 | -1.81 | 0.821 | -1.29 | 0.151 | -- | -1.24 | 20.4 | 1.625 | 1354 | -- | -- |
| 104.38 | 0.476 | 11.2 | -1.5 | 0.987 | -1.88 | -- | -3.65 | -1.26 | 20.7 | 0.7003 | 1420 | -- | -- |
| 111.2 | 0.491 | 11.2 | -1.83 | 0.787 | -1.37 | -- | -- | -1.32 | 20.2 | 1.61 | 1353 | -- | -- |
| 125.04 | 0.521 | 11.2 | -1.38 | -- | -1.94 | -- | -3.31 | -1.26 | -- | 0.73 | 2534 | -- | -- |
| 136.07 | 0.547 | 11.2 | -1.62 | 1.05 | -- | 0.271 | -- | -1.14 | 21.1 | -- | -- | -- | -- |
| 136.33 | 0.547 | 11.2 | -1.63 | 1.05 | -- | -- | -- | -1.14 | 21.1 | -- | -- | -- | -- |
| 120.77 | 0.512 | 11.2 | -1.85 | -- | -1.87 | -- | -- | -1.38 | -- | 1.56 | 2528 | -- | -- |
| 182.42 | 0.629 | 11.2 | -- | 0.817 | -1.49 | -- | -- | -1.2 | 20.1 | 8.489 | 5527 | -- | -- |
| 200.33 | 0.661 | 11.2 | -1.63 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 206.67 | 0.672 | 11.2 | -- | 1.06 | -- | -- | -- | -0.961 | 21 | -- | -- | -- | -- |
| 208.4 | 0.672 | 11.2 | -- | -- | -1.77 | -- | -- | -1.31 | -- | 7.144 | 2420 | -- | -- |
| 270.53 | 0.768 | 11.1 | -- | -- | -- | -- | -- | -0.968 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.52 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 2 | 99.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 99.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 99.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 9 | 101.37 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 22 |
| 13 | 101.59 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 14 | 101.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 17 | 101.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 18 | 101.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 19 | 101.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 7 |
| 35 | 102.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 40 | 102.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 13 |
| 41 | 102.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 13 |
| 42 | 102.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 13 |
| 48 | 102.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 101 | 103.02 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 102 | 103.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 109 | 103.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 16 |
| 110 | 103.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 148 | 103.22 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 163 | 103.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 191 | 103.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 200 | 103.48 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 201 | 103.48 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 203 | 103.49 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 243 | 103.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 262 | 103.70 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 339 | 103.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 420 | 104.16 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 441 | 104.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 479 | 104.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 481 | 104.41 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 485 | 104.42 | humidity | 80.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 590 | 104.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 16 |
| 626 | 104.95 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 673 | 105.08 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 674 | 105.09 | humidity | 80.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 719 | 105.22 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 786 | 105.42 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 796 | 105.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 797 | 105.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 806 | 105.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 809 | 105.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 810 | 105.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 855 | 105.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 866 | 105.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 890 | 105.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 891 | 105.62 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 903 | 105.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 933 | 105.80 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |