Os03g0270800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0270800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.62 | 0.565 | 6.14 | 0.164 | 0.724 | -2.03 | -0.832 | 3.27 | -0.194 | 11 | 18.69 | 307 | 19 | 20.1 |
| 147.63 | 0.566 | 6.18 | -0.331 | 1.2 | -2.37 | -0.316 | -- | -0.291 | 8.89 | 14.65 | 431 | 19 | 18.4 |
| 146.34 | 0.563 | 6.11 | 0.241 | 0.695 | -2.11 | -- | 3.83 | -0.177 | 10.5 | 18.69 | 349 | 18.6 | 19.7 |
| 146.69 | 0.564 | 6.18 | -0.291 | 1.23 | -2.2 | -- | -- | -0.307 | 8.93 | 14.74 | 446 | 19 | 18 |
| 161.27 | 0.591 | 6.12 | 0.512 | -- | -1.73 | -- | 4.25 | -0.106 | -- | 19.44 | 441 | 16.7 | 20.8 |
| 207.96 | 0.676 | 6.28 | -0.754 | 0.381 | -- | -0.541 | -- | -0.663 | 9.53 | -- | -- | -- | -- |
| 209.04 | 0.677 | 6.28 | -0.774 | 0.384 | -- | -- | -- | -0.664 | 9.45 | -- | -- | -- | -- |
| 170.01 | 0.607 | 6.21 | -0.158 | -- | -1.74 | -- | -- | -0.333 | -- | 7.655 | 2508 | 19.8 | 19.3 |
| 149.1 | 0.569 | 6.17 | -- | 1.31 | -2.32 | -- | -- | -0.282 | 8.88 | 14.6 | 451 | 19 | 17.9 |
| 217.72 | 0.689 | 6.29 | -0.776 | -- | -- | -- | -- | -0.663 | -- | -- | -- | -- | -- |
| 224.83 | 0.701 | 6.26 | -- | 0.386 | -- | -- | -- | -0.578 | 9.6 | -- | -- | -- | -- |
| 170.36 | 0.608 | 6.22 | -- | -- | -1.77 | -- | -- | -0.308 | -- | 7.849 | 2500 | 19.3 | 19.9 |
| 233.62 | 0.713 | 6.27 | -- | -- | -- | -- | -- | -0.577 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 39 | 155.09 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 40 | 155.12 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 54 | 156.54 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 87 | 158.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 92 | 159.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 114 | 160.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 121 | 161.13 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 123 | 161.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 127 | 161.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 131 | 161.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 240 | 162.40 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 252 | 162.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 346 | 163.13 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 356 | 163.17 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 367 | 163.24 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 373 | 163.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 13 |
| 386 | 163.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 403 | 163.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 408 | 163.35 | humidity | 70 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 465 | 163.46 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 470 | 163.47 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 524 | 163.59 | temperature | 25 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 529 | 163.60 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 530 | 163.60 | humidity | 80 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 539 | 163.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 12 |
| 568 | 163.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 12 |
| 601 | 163.74 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 618 | 163.76 | temperature | 20 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 629 | 163.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 729 | 163.91 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 18 |
| 748 | 163.93 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 19 |
| 764 | 163.95 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 816 | 164.02 | temperature | 20 | 14400 | > th | dose dependent | rect. | 15 | 7 |
| 856 | 164.05 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 985 | 164.16 | temperature | 25 | 43200 | > th | dose independent | rect. | 15 | 1 |