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Os03g0269800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.96 (0.0243) R2 : 0.507
β1 : 1.9 (0.089) R2dD : 0.511 R2D : 0.42
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.403 (0.0519) R2dN8 : 0.0873 R2N8 : -0.00313
σ : 0.456
deviance : 95.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.13 0.379 9.88 2.42 0.316 0.887 0.2 -1.68 0.663 3.9 25.53 302 -- --
68.71 0.386 9.92 2.15 0.295 0.998 -0.228 -- 0.601 3.02 25.5 309 -- --
65.23 0.376 9.89 2.41 0.316 0.901 -- -1.58 0.662 3.81 25.52 310 -- --
68.27 0.385 9.91 2.14 0.301 1.03 -- -- 0.603 4.56 25.22 214 -- --
67.34 0.382 9.88 2.48 -- 1.1 -- -1.63 0.706 -- 28 219 -- --
83.5 0.428 9.96 1.88 0.462 -- -0.248 -- 0.389 4.11 -- -- -- --
83.68 0.428 9.96 1.88 0.46 -- -- -- 0.39 4.11 -- -- -- --
70.45 0.391 9.91 2.18 -- 1.17 -- -- 0.647 -- 27.3 157 -- --
176.22 0.622 10 -- 0.467 0.193 -- -- 0.215 4.26 25.22 214 -- --
95.18 0.456 9.96 1.9 -- -- -- -- 0.403 -- -- -- -- --
176.83 0.622 10 -- 0.497 -- -- -- 0.181 4.05 -- -- -- --
185.26 0.636 10 -- -- 0.572 -- -- 0.257 -- 61.96 22 -- --
190.27 0.644 10 -- -- -- -- -- 0.192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.66 wind 9 43200 > th dose dependent rect. 18 9
2 63.67 wind 9 43200 > th dose dependent rect. 18 6
6 64.24 wind 9 43200 > th dose dependent rect. 18 3
7 64.29 wind 7 43200 > th dose dependent rect. 18 1
9 64.44 temperature 25 270 < th dose dependent rect. 21 22
20 64.73 temperature 15 720 > th dose dependent rect. 19 14
21 64.74 temperature 15 720 > th dose dependent sin 10 NA
22 64.82 radiation 1 4320 < th dose dependent rect. 6 1
23 64.82 temperature 25 270 < th dose dependent rect. 17 21
24 64.83 humidity 90 14400 > th dose dependent rect. 19 9
30 64.89 wind 9 43200 > th dose independent rect. 18 9
33 64.96 atmosphere 1005 43200 > th dose independent rect. 1 1
36 64.97 wind 9 43200 > th dose independent rect. 18 6
40 65.01 humidity 90 14400 > th dose dependent rect. 20 7
43 65.03 atmosphere 1005 43200 < th dose independent rect. 1 1
46 65.06 wind 7 43200 > th dose independent rect. 18 1
63 65.13 humidity 90 14400 > th dose dependent rect. 19 13
73 65.19 temperature 30 30 < th dose dependent rect. 7 23
74 65.20 radiation 1 4320 < th dose dependent rect. 6 3
87 65.26 wind 9 43200 < th dose independent rect. 18 3
94 65.29 wind 7 43200 < th dose independent rect. 18 1
101 65.31 humidity 90 14400 > th dose dependent sin 10 NA
104 65.32 wind 9 43200 > th dose independent rect. 18 3
114 65.37 temperature 25 270 < th dose dependent no NA NA
131 65.44 humidity 90 14400 > th dose dependent rect. 2 8
133 65.46 temperature 15 720 > th dose dependent rect. 21 10
140 65.53 wind 9 43200 < th dose independent rect. 18 9
154 65.58 wind 9 43200 < th dose independent rect. 5 1
155 65.58 humidity 90 14400 > th dose dependent rect. 1 10
179 65.65 wind 9 43200 < th dose independent rect. 18 6
182 65.66 humidity 80 43200 > th dose independent rect. 18 1
189 65.68 temperature 15 720 > th dose dependent rect. 21 8
199 65.71 humidity 80 43200 < th dose independent rect. 17 2
220 65.77 temperature 25 270 < th dose dependent rect. 6 23
224 65.79 temperature 15 270 > th dose dependent rect. 23 23
233 65.82 temperature 25 270 < th dose dependent rect. 3 23
276 65.93 temperature 30 30 < th dose dependent rect. 9 23
322 66.08 temperature 15 270 > th dose dependent rect. 21 23
336 66.14 wind 9 43200 > th dose independent rect. 5 1
352 66.19 humidity 90 43200 < th dose independent rect. 6 1
375 66.23 temperature 30 10 < th dose dependent rect. 18 23
376 66.24 atmosphere 1005 43200 > th dose independent rect. 11 1
406 66.32 temperature 10 10 > th dose dependent no NA NA
413 66.34 atmosphere 1005 43200 > th dose independent rect. 22 1
414 66.34 atmosphere 1005 43200 < th dose independent rect. 11 1
424 66.35 temperature 30 10 < th dose dependent no NA NA
460 66.41 temperature 15 270 > th dose dependent rect. 17 23
461 66.41 temperature 30 10 < th dose dependent rect. 3 23
472 66.44 temperature 30 10 < th dose dependent rect. 15 23
481 66.46 temperature 30 30 < th dose dependent rect. 11 23
492 66.48 temperature 10 270 > th dose dependent no NA NA
548 66.58 wind 9 43200 > th dose dependent rect. 5 1
573 66.62 atmosphere 1005 43200 < th dose independent rect. 22 16
610 66.68 atmosphere 1005 43200 > th dose independent rect. 22 16
615 66.69 atmosphere 1005 43200 > th dose independent rect. 10 3
624 66.69 temperature 30 30 < th dose dependent rect. 13 23
625 66.70 atmosphere 1005 43200 < th dose independent sin 9 NA
659 66.72 temperature 30 270 < th dose dependent sin 8 NA
746 66.79 temperature 15 270 > th dose dependent rect. 10 23
756 66.81 atmosphere 1005 43200 > th dose independent sin 9 NA
798 66.84 atmosphere 1005 43200 < th dose independent rect. 9 5
827 66.87 atmosphere 1005 43200 > th dose independent rect. 3 1
836 66.87 humidity 80 43200 > th dose dependent rect. 19 1
839 66.87 temperature 15 270 > th dose dependent rect. 15 23
866 66.89 temperature 25 270 < th dose dependent sin 6 NA
902 66.94 temperature 15 30 > th dose dependent rect. 17 23
912 66.96 humidity 90 43200 > th dose independent rect. 6 1
954 66.99 temperature 25 30 < th dose dependent rect. 1 23
994 67.02 temperature 25 720 < th dose dependent sin 10 NA