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Os03g0267700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0232) R2 : 0.81
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0695) R2dC : 0.209 R2C : -0.331
β3 : 2.68 (0.0617) R2dE : 1.13 R2E : 0.588
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.198 (0.0487) R2dN8 : 0.00899 R2N8 : 0.00852
σ : 0.434
deviance : 86.87
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_____
C
peak time of C : 20.8
E
wheather : radiation
threshold : 1.553
memory length : 263
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 21.2
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.69 0.387 10 -0.178 1.34 2.78 1.04 -1.2 -0.209 21.1 1.554 264 21.1 --
69.53 0.388 10 -0.199 1.37 2.94 2.08 -- -0.215 22.1 1.559 265 20.7 --
69.82 0.389 10 -0.155 1.39 2.74 -- -1.76 -0.212 20.7 1.551 258 21.4 --
85.48 0.431 10 -0.244 1.38 2.74 -- -- -0.205 21 1.55 261 21.3 --
104.18 0.475 10 -0.162 -- 2.48 -- -1.63 -0.215 -- 1.81 432 21.1 --
126.08 0.526 9.97 -0.137 2.33 -- -1.29 -- -0.216 14.5 -- -- -- --
131.97 0.538 9.98 -0.17 2.33 -- -- -- -0.223 14.6 -- -- -- --
112.83 0.495 9.99 -0.256 -- 2.4 -- -- -0.267 -- 1.56 431 21.1 --
86.87 0.434 10 -- 1.29 2.68 -- -- -0.198 20.8 1.553 263 21.2 --
450.13 0.991 9.99 -0.269 -- -- -- -- -0.281 -- -- -- -- --
132.73 0.539 9.97 -- 2.33 -- -- -- -0.204 14.6 -- -- -- --
114.5 0.498 9.98 -- -- 2.4 -- -- -0.238 -- 1.56 431 21 --
452.04 0.992 9.99 -- -- -- -- -- -0.252 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.67 radiation 10.0 270 < th dose independent rect. 1 6
2 65.19 radiation 20.0 270 < th dose dependent rect. 1 6
9 66.11 radiation 20.0 90 < th dose independent rect. 3 6
11 66.39 radiation 1.0 270 < th dose independent rect. 2 15
12 66.49 radiation 10.0 270 < th dose independent rect. 2 4
14 66.54 wind 5.0 270 < th dose independent rect. 1 6
16 66.62 precipitation 0.1 270 < th dose independent rect. 1 6
17 66.62 precipitation 0.1 270 < th dose dependent rect. 1 6
18 66.68 wind 5.0 270 < th dose independent rect. 2 4
22 66.82 precipitation 0.1 270 < th dose independent rect. 2 4
23 66.82 precipitation 0.1 270 < th dose dependent rect. 2 4
24 66.89 humidity 70.0 270 > th dose independent rect. 1 6
25 66.98 wind 9.0 270 < th dose independent rect. 7 18
32 67.27 wind 9.0 270 < th dose independent rect. 6 20
34 67.30 radiation 1.0 270 < th dose dependent rect. 2 16
38 67.43 radiation 40.0 90 < th dose dependent rect. 3 6
42 67.49 temperature 10.0 270 > th dose independent rect. 1 6
44 67.49 temperature 30.0 270 < th dose independent rect. 1 6
45 67.49 humidity 50.0 270 > th dose independent rect. 1 6
47 67.49 atmosphere 995.0 270 > th dose independent rect. 1 6
48 67.49 atmosphere 1015.0 270 < th dose independent rect. 1 6
50 67.49 temperature 10.0 270 > th dose independent rect. 7 18
51 67.56 atmosphere 1010.0 270 < th dose independent rect. 2 4
58 67.86 temperature 10.0 270 > th dose independent rect. 2 4
60 67.86 temperature 30.0 270 < th dose independent rect. 2 4
61 67.86 humidity 50.0 270 > th dose independent rect. 2 4
64 67.86 atmosphere 995.0 270 > th dose independent rect. 2 4
69 67.86 temperature 10.0 270 > th dose independent rect. 6 20
72 68.06 radiation 10.0 270 < th dose dependent rect. 1 12
73 68.07 precipitation 0.1 270 < th dose independent rect. 3 2
74 68.07 precipitation 0.1 270 < th dose dependent rect. 3 2
102 68.77 wind 9.0 270 < th dose independent rect. 5 22
104 68.80 wind 7.0 270 < th dose independent rect. 3 2
107 68.86 precipitation 0.1 270 < th dose independent rect. 7 18
108 68.86 precipitation 0.1 270 < th dose dependent rect. 7 18
116 69.20 radiation 1.0 270 < th dose independent rect. 3 2
118 69.20 radiation 10.0 270 < th dose dependent rect. 3 2
123 69.24 temperature 10.0 270 > th dose independent rect. 3 2
125 69.24 temperature 30.0 270 < th dose independent rect. 3 2
126 69.24 humidity 50.0 270 > th dose independent rect. 3 2
129 69.24 atmosphere 995.0 270 > th dose independent rect. 3 2
130 69.24 atmosphere 1010.0 270 < th dose independent rect. 3 2
135 69.24 temperature 10.0 270 > th dose independent rect. 5 22
137 69.29 radiation 1.0 270 > th dose independent sin 3 NA
143 69.46 wind 9.0 270 < th dose dependent rect. 2 4
145 69.49 humidity 50.0 270 > th dose dependent rect. 1 6
148 69.52 temperature 10.0 270 > th dose dependent rect. 2 4
154 69.74 humidity 50.0 270 > th dose dependent rect. 2 4
157 69.80 precipitation 0.1 270 < th dose independent rect. 6 8
158 69.80 precipitation 0.1 270 < th dose independent rect. 14 16
159 69.80 precipitation 0.1 270 < th dose dependent rect. 6 8
160 69.80 precipitation 0.1 270 < th dose dependent rect. 14 16
163 69.89 wind 9.0 270 < th dose dependent rect. 1 6
164 69.90 wind 9.0 270 < th dose independent rect. 6 8
172 70.04 radiation 40.0 270 < th dose independent rect. 14 16
178 70.12 temperature 10.0 270 > th dose independent rect. 6 8
179 70.12 atmosphere 995.0 270 > th dose independent rect. 6 8
180 70.12 atmosphere 1015.0 270 < th dose independent rect. 6 8
181 70.12 temperature 10.0 270 > th dose independent rect. 14 16
190 70.51 radiation 1.0 270 < th dose independent sin 3 NA
196 70.57 radiation 1.0 270 > th dose independent rect. 6 8
216 70.61 humidity 50.0 90 > th dose dependent rect. 3 6
220 70.64 temperature 10.0 270 > th dose dependent rect. 1 6
226 70.85 humidity 50.0 270 > th dose dependent rect. 3 2
233 70.97 wind 9.0 270 < th dose independent rect. 14 16
238 71.15 radiation 40.0 90 < th dose dependent rect. 3 8
240 71.25 wind 1.0 270 > th dose independent rect. 1 5
242 71.33 wind 9.0 270 < th dose dependent rect. 3 2
251 71.49 atmosphere 995.0 270 > th dose independent rect. 7 18
279 71.89 radiation 1.0 270 < th dose dependent sin 3 NA
284 71.97 temperature 10.0 270 > th dose dependent rect. 3 2
302 72.16 humidity 50.0 270 > th dose independent rect. 6 8
373 73.27 wind 7.0 270 < th dose independent rect. 17 9
386 73.47 precipitation 0.1 270 < th dose independent rect. 2 16
388 73.47 precipitation 0.1 270 < th dose dependent rect. 2 16
404 73.56 radiation 10.0 270 < th dose dependent sin 5 NA
436 73.94 radiation 10.0 270 < th dose independent rect. 18 8
448 74.06 radiation 10.0 270 < th dose dependent rect. 18 8
492 74.30 radiation 40.0 90 < th dose dependent rect. 15 17
494 74.33 atmosphere 995.0 270 > th dose independent rect. 18 8
498 74.34 temperature 10.0 270 > th dose independent rect. 18 8
499 74.34 humidity 50.0 270 > th dose independent rect. 18 8
503 74.34 temperature 10.0 270 > th dose independent rect. 2 16
504 74.34 atmosphere 1015.0 270 < th dose independent rect. 2 16
509 74.42 wind 9.0 10 < th dose dependent rect. 3 6
537 74.63 precipitation 0.1 10 < th dose independent rect. 3 6
538 74.63 precipitation 0.1 10 < th dose dependent rect. 3 6
544 74.69 atmosphere 995.0 270 > th dose independent rect. 14 16
558 74.83 humidity 70.0 10 > th dose independent rect. 3 6
564 74.90 wind 5.0 10 < th dose independent rect. 3 6
578 74.99 radiation 40.0 10 < th dose dependent rect. 4 16
587 75.06 radiation 40.0 10 < th dose dependent rect. 4 5
620 75.32 wind 9.0 10 < th dose independent rect. 9 18
626 75.40 radiation 40.0 10 < th dose dependent rect. 14 19
643 75.60 atmosphere 1015.0 270 < th dose independent rect. 7 18
649 75.67 precipitation 0.1 270 < th dose independent rect. 18 8
650 75.67 precipitation 0.1 270 < th dose dependent rect. 18 8
656 75.77 wind 9.0 270 < th dose dependent rect. 7 18
667 75.89 humidity 60.0 90 > th dose dependent rect. 3 8
683 75.97 wind 9.0 270 < th dose independent rect. 2 16
701 76.04 temperature 10.0 10 > th dose independent rect. 3 6
703 76.04 temperature 30.0 10 < th dose independent rect. 3 6
704 76.04 humidity 50.0 10 > th dose independent rect. 3 6
706 76.04 atmosphere 995.0 10 > th dose independent rect. 3 6
707 76.04 atmosphere 1015.0 10 < th dose independent rect. 3 6
709 76.04 temperature 10.0 10 > th dose independent rect. 9 18
726 76.19 precipitation 0.1 10 < th dose independent rect. 9 18
727 76.19 precipitation 0.1 10 < th dose dependent rect. 9 18
747 76.44 radiation 40.0 90 < th dose dependent rect. 13 19
750 76.49 radiation 10.0 10 < th dose independent rect. 4 16
778 76.61 radiation 30.0 90 < th dose dependent rect. 3 10
789 76.69 humidity 50.0 270 > th dose independent rect. 14 16
795 76.74 wind 1.0 270 > th dose independent rect. 7 18
807 76.80 radiation 40.0 270 < th dose dependent rect. 15 15
867 77.17 radiation 40.0 10 < th dose dependent rect. 12 21
897 77.37 wind 9.0 270 < th dose independent rect. 20 15
899 77.40 temperature 30.0 270 < th dose independent rect. 18 8
910 77.48 wind 1.0 270 > th dose independent rect. 11 9
914 77.50 temperature 10.0 270 > th dose independent rect. 11 9
915 77.50 atmosphere 1015.0 270 < th dose independent rect. 11 9
916 77.50 temperature 10.0 270 > th dose independent rect. 20 15
917 77.50 atmosphere 995.0 270 > th dose independent rect. 20 15
956 77.62 precipitation 0.1 270 < th dose independent rect. 11 9
957 77.62 precipitation 0.1 270 < th dose dependent rect. 11 9
981 77.69 humidity 50.0 270 > th dose independent rect. 20 15
982 77.69 wind 1.0 270 > th dose independent rect. 13 17
991 77.71 radiation 10.0 10 < th dose independent rect. 4 18
994 77.72 radiation 30.0 90 < th dose dependent rect. 3 14