Os03g0266800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os03g0266800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.85 | 0.483 | 9.22 | -1.16 | 0.36 | -2.08 | -1.12 | 0.917 | -0.582 | 17.9 | 28.4 | 10 | -- | -- |
| 106.71 | 0.481 | 9.2 | -0.987 | 0.347 | -2.07 | -1.4 | -- | -0.541 | 17.3 | 28.13 | 6 | -- | -- |
| 108.32 | 0.488 | 9.23 | -1.21 | 0.372 | -2.14 | -- | 1.17 | -0.605 | 18.9 | 28.4 | 10 | -- | -- |
| 110.34 | 0.492 | 9.21 | -1.01 | 0.379 | -2.15 | -- | -- | -0.571 | 18.8 | 27.72 | 18 | -- | -- |
| 114.19 | 0.498 | 9.23 | -1.25 | -- | -2.26 | -- | 1.13 | -0.645 | -- | 28.31 | 50 | -- | -- |
| 173.15 | 0.617 | 9.1 | -0.479 | 0.868 | -- | -1.11 | -- | -0.0999 | 15.7 | -- | -- | -- | -- |
| 176.85 | 0.623 | 9.1 | -0.496 | 0.861 | -- | -- | -- | -0.106 | 15.7 | -- | -- | -- | -- |
| 115.98 | 0.502 | 9.2 | -1.07 | -- | -2.28 | -- | -- | -0.601 | -- | 28.07 | 50 | -- | -- |
| 134.62 | 0.543 | 9.16 | -- | 0.448 | -1.75 | -- | -- | -0.383 | 17.7 | 27.72 | 18 | -- | -- |
| 217.97 | 0.69 | 9.1 | -0.532 | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
| 183.32 | 0.633 | 9.09 | -- | 0.871 | -- | -- | -- | -0.0511 | 15.7 | -- | -- | -- | -- |
| 143.58 | 0.56 | 9.16 | -- | -- | -1.94 | -- | -- | -0.409 | -- | 28.43 | 37 | -- | -- |
| 225.43 | 0.701 | 9.09 | -- | -- | -- | -- | -- | -0.0703 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 3 | 106.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 106.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 8 | 106.91 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 9 | 107.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 10 | 107.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 16 | 107.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 107.88 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 20 | 108.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 23 | 108.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 29 | 108.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 36 | 109.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 58 | 111.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 73 | 112.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 89 | 113.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 97 | 114.24 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 104 | 114.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 133 | 115.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 156 | 116.22 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 160 | 116.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 204 | 117.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 232 | 118.33 | temperature | 25 | 10 | < th | dose dependent | sin | 2 | NA |
| 239 | 118.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 278 | 118.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 361 | 120.37 | temperature | 15 | 10 | > th | dose dependent | sin | 6 | NA |
| 376 | 120.63 | temperature | 30 | 30 | < th | dose dependent | sin | 6 | NA |
| 460 | 121.55 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 483 | 121.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 522 | 122.29 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 528 | 122.35 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 564 | 122.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 583 | 122.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 630 | 123.43 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 674 | 123.85 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 743 | 124.71 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 762 | 124.87 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 843 | 125.64 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 910 | 126.16 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 920 | 126.25 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 962 | 126.49 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 986 | 126.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 15 |