Os03g0265700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Src homology-3 domain containing protein.
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Os03g0265700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Src homology-3 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.15 | 0.231 | 11.2 | 0.645 | 0.238 | 0.555 | 0.28 | -0.271 | 0.414 | 18.3 | 92 | 550 | -- | -- |
| 24.26 | 0.229 | 11.2 | 0.633 | 0.249 | 0.581 | 0.345 | -- | 0.415 | 18.3 | 92 | 545 | -- | -- |
| 24.3 | 0.23 | 11.2 | 0.66 | 0.241 | 0.564 | -- | -0.457 | 0.411 | 18 | 92.28 | 503 | -- | -- |
| 24.62 | 0.231 | 11.2 | 0.624 | 0.227 | 0.553 | -- | -- | 0.409 | 18.4 | 92 | 594 | -- | -- |
| 26.2 | 0.238 | 11.2 | 0.652 | -- | 0.372 | -- | -0.33 | 0.385 | -- | 92.26 | 803 | -- | -- |
| 28.39 | 0.25 | 11.2 | 0.651 | 0.108 | -- | 0.134 | -- | 0.325 | 16.8 | -- | -- | -- | -- |
| 28.43 | 0.25 | 11.2 | 0.651 | 0.109 | -- | -- | -- | 0.325 | 16.4 | -- | -- | -- | -- |
| 26.45 | 0.24 | 11.2 | 0.638 | -- | 0.382 | -- | -- | 0.396 | -- | 92 | 826 | -- | -- |
| 34.58 | 0.274 | 11.2 | -- | 0.275 | 0.661 | -- | -- | 0.359 | 18.2 | 92 | 480 | -- | -- |
| 29.07 | 0.252 | 11.2 | 0.647 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 39.61 | 0.294 | 11.2 | -- | 0.097 | -- | -- | -- | 0.253 | 16.5 | -- | -- | -- | -- |
| 36.38 | 0.281 | 11.2 | -- | -- | 0.465 | -- | -- | 0.334 | -- | 91 | 945 | -- | -- |
| 40.12 | 0.296 | 11.2 | -- | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.95 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 6 | 24.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 7 | 24.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 19 |
| 19 | 24.28 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 26 | 24.36 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 57 | 24.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 108 | 24.52 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 110 | 24.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 121 | 24.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 123 | 24.56 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 161 | 24.66 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 178 | 24.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 181 | 24.68 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 201 | 24.72 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 222 | 24.74 | humidity | 90 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 227 | 24.74 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 228 | 24.75 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 258 | 24.77 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 285 | 24.79 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 286 | 24.79 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 300 | 24.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 307 | 24.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 326 | 24.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 340 | 24.84 | humidity | 90 | 720 | > th | dose dependent | sin | 22 | NA |
| 341 | 24.84 | humidity | 90 | 720 | > th | dose dependent | no | NA | NA |
| 347 | 24.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 1 | 17 |
| 363 | 24.85 | temperature | 15 | 90 | > th | dose dependent | sin | 1 | NA |
| 367 | 24.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 375 | 24.86 | radiation | 1 | 1440 | > th | dose independent | sin | 21 | NA |
| 403 | 24.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 437 | 24.89 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 476 | 24.90 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 500 | 24.91 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 522 | 24.92 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 568 | 24.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 575 | 24.93 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 595 | 24.93 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 599 | 24.94 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 640 | 24.95 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 671 | 24.96 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 21 |
| 673 | 24.96 | humidity | 90 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 699 | 24.97 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 710 | 24.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 734 | 24.98 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 748 | 24.99 | humidity | 90 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 793 | 25.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 810 | 25.01 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 880 | 25.04 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 8 |
| 903 | 25.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 907 | 25.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 956 | 25.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 968 | 25.07 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |