Os03g0265300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os03g0265300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.64 | 0.268 | 8.84 | -1.34 | 0.089 | 1.02 | -0.45 | -1.27 | -0.068 | 11.5 | 17.61 | 1810 | -- | -- |
| 33.91 | 0.271 | 8.8 | -1.03 | 0.114 | 1.13 | -0.426 | -- | 0.017 | 11.2 | 14.22 | 1918 | -- | -- |
| 33.43 | 0.269 | 8.84 | -1.36 | 0.0998 | 1.02 | -- | -1.28 | -0.0698 | 10 | 17.6 | 1807 | -- | -- |
| 34.59 | 0.274 | 8.8 | -1.05 | 0.128 | 1.14 | -- | -- | 0.0125 | 10.2 | 14.38 | 1931 | -- | -- |
| 33.85 | 0.271 | 8.85 | -1.35 | -- | 1.02 | -- | -1.26 | -0.068 | -- | 17.52 | 1709 | -- | -- |
| 55.61 | 0.35 | 8.75 | -0.655 | 0.0558 | -- | -0.492 | -- | 0.231 | 12.8 | -- | -- | -- | -- |
| 56.63 | 0.352 | 8.76 | -0.673 | 0.0568 | -- | -- | -- | 0.228 | 12.7 | -- | -- | -- | -- |
| 35.14 | 0.276 | 8.8 | -1.04 | -- | 1.14 | -- | -- | 0.0167 | -- | 13.23 | 1721 | -- | -- |
| 58.65 | 0.357 | 8.77 | -- | 0.0844 | 0.558 | -- | -- | 0.197 | 9.66 | 21.19 | 1888 | -- | -- |
| 56.83 | 0.352 | 8.76 | -0.675 | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
| 68.58 | 0.387 | 8.74 | -- | 0.0677 | -- | -- | -- | 0.303 | 13.1 | -- | -- | -- | -- |
| 59.02 | 0.358 | 8.76 | -- | -- | 0.532 | -- | -- | 0.198 | -- | 20.79 | 1634 | -- | -- |
| 68.86 | 0.387 | 8.74 | -- | -- | -- | -- | -- | 0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 2 | 30.18 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 4 | 30.29 | temperature | 15 | 720 | > th | dose dependent | sin | 14 | NA |
| 11 | 30.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 20 | 30.71 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 21 | 30.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 31 | 30.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 32 | 30.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 106 | 31.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 155 | 32.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 162 | 32.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 567 | 32.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 646 | 32.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 771 | 33.08 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 812 | 33.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 823 | 33.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 826 | 33.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 876 | 33.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |