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Os03g0265100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, group 1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0173) R2 : 0.857
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.23 (0.0427) R2dC : 0.861 R2C : 0.855
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0799 (0.0363) R2dN8 : 0.00196 R2N8 : -0.00344
σ : 0.325
deviance : 48.39
__
_____
C
peak time of C : 9.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35 0.278 12.9 -0.675 2.23 0.376 -0.315 0.0405 -0.0614 9.28 1014 7053 -- --
34.97 0.275 12.9 -0.673 2.22 0.367 -0.291 -- -0.0675 9.28 1014 7053 -- --
35.34 0.277 12.9 -0.681 2.23 0.387 -- 0.0555 -0.0574 9.28 1014 7069 -- --
35.32 0.277 12.9 -0.685 2.23 0.358 -- -- -0.0613 9.28 1014 7050 -- --
324.05 0.838 12.9 -0.652 -- 0.452 -- 0.259 -0.056 -- 1014 7123 -- --
40.07 0.297 12.9 -0.536 2.23 -- -0.337 -- 0.0191 9.28 -- -- -- --
40.47 0.298 12.9 -0.548 2.23 -- -- -- 0.0188 9.28 -- -- -- --
323.78 0.838 12.9 -0.787 -- 0.446 -- -- -0.0774 -- 1013 7122 -- --
45.1 0.313 12.9 -- 2.23 0.302 -- -- -0.0283 9.33 1014 4311 -- --
330.41 0.849 12.9 -0.558 -- -- -- -- 0.0286 -- -- -- -- --
48.39 0.325 12.8 -- 2.23 -- -- -- 0.0799 9.3 -- -- -- --
332.86 0.85 12.9 -- -- 0.432 -- -- 0.0341 -- 1014 4424 -- --
338.62 0.859 12.9 -- -- -- -- -- 0.0905 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.66 temperature 10.0 10 > th dose dependent rect. 20 20
3 30.97 radiation 1.0 30 < th dose independent rect. 5 15
4 31.06 radiation 10.0 10 < th dose dependent rect. 6 14
6 31.09 temperature 15.0 10 > th dose independent rect. 20 20
13 31.28 temperature 10.0 90 > th dose dependent rect. 20 9
15 31.32 radiation 20.0 10 < th dose dependent rect. 16 4
17 31.39 humidity 50.0 30 > th dose independent rect. 16 4
18 31.40 radiation 10.0 10 < th dose dependent rect. 14 6
39 31.54 radiation 1.0 30 < th dose independent rect. 13 7
53 31.60 radiation 1.0 30 < th dose independent rect. 15 5
73 31.76 radiation 1.0 90 < th dose dependent rect. 17 2
74 31.76 radiation 1.0 90 < th dose dependent rect. 15 4
95 31.88 temperature 10.0 1440 > th dose independent rect. 17 4
98 31.88 radiation 30.0 1440 < th dose independent rect. 17 4
104 31.88 temperature 10.0 1440 > th dose independent rect. 21 20
111 31.91 temperature 30.0 10 < th dose independent rect. 16 4
115 31.93 atmosphere 995.0 10 > th dose independent rect. 16 4
119 31.94 wind 1.0 30 > th dose independent rect. 5 15
125 31.98 temperature 10.0 10 > th dose dependent rect. 20 10
126 31.99 temperature 10.0 10 > th dose independent rect. 16 4
130 31.99 atmosphere 1010.0 10 < th dose independent rect. 16 4
134 31.99 radiation 40.0 10 < th dose independent rect. 16 4
142 32.00 precipitation 0.1 30 < th dose independent rect. 20 20
143 32.00 precipitation 0.1 30 < th dose dependent rect. 20 20
144 32.01 wind 1.0 10 > th dose independent rect. 16 4
151 32.05 wind 9.0 30 < th dose independent rect. 16 4
153 32.06 precipitation 0.1 30 < th dose independent rect. 16 4
154 32.06 precipitation 0.1 30 < th dose dependent rect. 16 4
157 32.07 wind 9.0 10 < th dose independent rect. 20 20
165 32.10 humidity 50.0 30 > th dose independent rect. 20 20
169 32.11 atmosphere 995.0 10 > th dose independent rect. 20 20
173 32.12 atmosphere 995.0 10 > th dose dependent rect. 16 4
183 32.17 precipitation 0.1 270 < th dose independent rect. 17 23
185 32.17 precipitation 0.1 270 < th dose dependent rect. 17 23
191 32.22 temperature 10.0 1440 > th dose independent rect. 21 9
194 32.22 temperature 30.0 1440 < th dose independent rect. 21 9
198 32.22 humidity 50.0 1440 > th dose independent rect. 21 9
204 32.22 atmosphere 995.0 1440 > th dose independent rect. 21 9
205 32.22 radiation 20.0 1440 < th dose independent rect. 21 9
214 32.22 temperature 10.0 1440 > th dose independent rect. 6 15
225 32.30 temperature 15.0 90 > th dose independent rect. 20 9
243 32.42 temperature 15.0 270 > th dose independent rect. 18 21
270 32.55 atmosphere 1015.0 30 < th dose independent rect. 20 20
279 32.60 radiation 10.0 10 < th dose independent rect. 20 10
290 32.64 wind 1.0 90 > th dose dependent rect. 16 4
307 32.75 humidity 50.0 270 > th dose independent rect. 18 21
310 32.76 wind 1.0 270 > th dose independent rect. 16 1
314 32.79 temperature 10.0 270 > th dose independent rect. 16 1
316 32.79 atmosphere 1010.0 270 < th dose independent rect. 16 1
318 32.79 radiation 40.0 270 < th dose independent rect. 16 1
319 32.79 temperature 10.0 270 > th dose independent rect. 17 23
330 32.84 humidity 50.0 10 > th dose dependent rect. 16 4
337 32.87 precipitation 0.1 270 < th dose independent rect. 16 1
338 32.87 precipitation 0.1 270 < th dose dependent rect. 16 1
341 32.89 temperature 15.0 10 > th dose independent rect. 20 10
343 32.90 wind 9.0 270 < th dose independent rect. 16 1
344 32.90 precipitation 0.1 90 < th dose independent rect. 20 9
345 32.90 precipitation 0.1 90 < th dose dependent rect. 20 9
346 32.91 wind 7.0 90 < th dose independent rect. 20 9
350 32.92 temperature 30.0 90 < th dose independent rect. 20 9
351 32.92 humidity 50.0 90 > th dose independent rect. 20 9
354 32.92 atmosphere 995.0 90 > th dose independent rect. 20 9
355 32.92 radiation 20.0 90 < th dose independent rect. 20 9
358 32.92 temperature 10.0 90 > th dose independent rect. 5 15
359 32.92 atmosphere 1015.0 90 < th dose independent rect. 5 15
361 32.93 radiation 1.0 90 < th dose independent rect. 20 9
365 32.93 radiation 20.0 90 < th dose dependent rect. 20 9
378 32.97 temperature 30.0 10 < th dose dependent rect. 16 4
398 33.03 radiation 20.0 10 < th dose dependent rect. 20 10
401 33.05 atmosphere 995.0 270 > th dose independent rect. 16 1
403 33.05 radiation 40.0 270 < th dose dependent rect. 16 1
407 33.06 atmosphere 995.0 270 > th dose independent rect. 18 21
412 33.07 temperature 20.0 270 > th dose independent rect. 9 5
437 33.13 atmosphere 995.0 90 > th dose independent rect. 5 15
449 33.16 wind 9.0 90 < th dose independent rect. 5 15
454 33.18 humidity 50.0 1440 > th dose independent rect. 18 3
470 33.18 wind 9.0 270 < th dose independent rect. 18 21
493 33.26 atmosphere 1015.0 30 < th dose dependent rect. 16 4
514 33.31 wind 1.0 270 > th dose dependent rect. 16 1
524 33.34 wind 1.0 30 > th dose independent rect. 2 18
528 33.36 wind 7.0 10 < th dose independent rect. 20 10
529 33.36 precipitation 0.1 90 < th dose independent rect. 5 15
532 33.36 precipitation 0.1 90 < th dose dependent rect. 5 15
534 33.37 radiation 1.0 30 < th dose independent sin 22 NA
538 33.37 radiation 10.0 10 < th dose dependent sin 21 NA
556 33.39 temperature 30.0 10 < th dose independent rect. 20 10
557 33.39 humidity 50.0 10 > th dose independent rect. 20 10
560 33.39 atmosphere 995.0 10 > th dose independent rect. 20 10
565 33.39 temperature 10.0 10 > th dose independent rect. 6 14
567 33.39 atmosphere 1015.0 10 < th dose independent rect. 6 14
570 33.40 humidity 90.0 270 < th dose independent rect. 15 2
571 33.40 radiation 1.0 270 > th dose independent rect. 9 5
572 33.40 temperature 30.0 270 < th dose independent rect. 18 10
597 33.43 radiation 1.0 270 > th dose independent rect. 8 7
654 33.55 atmosphere 1010.0 90 < th dose independent rect. 20 9
656 33.55 precipitation 0.1 10 < th dose independent rect. 20 10
657 33.55 precipitation 0.1 10 < th dose dependent rect. 20 10
658 33.56 precipitation 0.1 10 < th dose independent rect. 6 14
659 33.56 atmosphere 1015.0 270 < th dose dependent rect. 16 1
660 33.56 precipitation 0.1 10 < th dose dependent rect. 6 14
669 33.58 humidity 60.0 270 > th dose independent rect. 18 10
670 33.58 atmosphere 1010.0 10 < th dose independent rect. 20 10
680 33.59 atmosphere 995.0 10 > th dose independent rect. 6 14
681 33.60 humidity 50.0 270 > th dose independent rect. 9 5
688 33.61 radiation 1.0 30 > th dose independent sin 22 NA
696 33.63 radiation 1.0 270 < th dose independent rect. 18 10
705 33.64 atmosphere 995.0 270 > th dose dependent rect. 16 1
711 33.64 temperature 10.0 90 > th dose dependent rect. 11 14
765 33.72 humidity 50.0 90 > th dose independent rect. 16 17
788 33.75 precipitation 0.1 270 < th dose independent rect. 9 5
795 33.75 precipitation 0.1 270 < th dose dependent rect. 9 5
817 33.78 wind 9.0 30 < th dose dependent rect. 16 4
818 33.78 radiation 1.0 270 < th dose dependent rect. 18 10
840 33.81 atmosphere 995.0 270 > th dose independent rect. 9 5
842 33.81 atmosphere 1015.0 270 < th dose independent rect. 9 5
843 33.81 temperature 10.0 270 > th dose independent rect. 14 19
848 33.82 temperature 30.0 90 < th dose independent rect. 20 19
855 33.83 humidity 50.0 270 > th dose independent rect. 8 7
858 33.84 humidity 90.0 270 < th dose independent rect. 10 3
920 33.88 temperature 20.0 10 > th dose independent rect. 10 6
948 33.92 humidity 90.0 10 < th dose independent rect. 16 4
950 33.92 wind 9.0 270 < th dose independent rect. 18 10
951 33.92 atmosphere 995.0 270 > th dose independent rect. 18 10
954 33.93 wind 9.0 270 < th dose independent rect. 9 5
966 33.95 humidity 90.0 270 < th dose independent rect. 9 5