Os03g0263900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calcium-binding EF-hand domain containing protein.
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Os03g0263900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Calcium-binding EF-hand domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.86 | 0.537 | 7.9 | 0.997 | 2.46 | 1.05 | -0.421 | -12.5 | -0.994 | 6.61 | 29.8 | 4010 | -- | -- |
| 147.77 | 0.571 | 8.17 | -1.1 | 2.54 | -0.226 | -0.316 | -- | -1.2 | 6.5 | 29.8 | 4010 | -- | -- |
| 131.17 | 0.533 | 7.9 | 0.974 | 2.45 | 1.05 | -- | -12.5 | -0.992 | 6.62 | 29.81 | 3941 | -- | -- |
| 132.87 | 0.537 | 8.24 | -1.17 | 2.42 | -0.61 | -- | -- | -1.52 | 6.62 | 32 | 18731 | -- | -- |
| 439.58 | 0.976 | 7.93 | 1.36 | -- | 0.924 | -- | -11.8 | -0.69 | -- | 29.21 | 4007 | -- | -- |
| 149.44 | 0.573 | 8.17 | -1.07 | 2.5 | -- | -0.406 | -- | -1.21 | 6.58 | -- | -- | -- | -- |
| 149.86 | 0.573 | 8.17 | -1.08 | 2.5 | -- | -- | -- | -1.21 | 6.57 | -- | -- | -- | -- |
| 455.12 | 0.994 | 8.27 | -1.17 | -- | -0.636 | -- | -- | -1.43 | -- | 32.01 | 18723 | -- | -- |
| 176.28 | 0.618 | 8.18 | -- | 2.47 | -0.325 | -- | -- | -1.24 | 6.62 | 31.8 | 18527 | -- | -- |
| 474.84 | 1.02 | 8.22 | -1.02 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 180.57 | 0.629 | 8.15 | -- | 2.48 | -- | -- | -- | -1.09 | 6.6 | -- | -- | -- | -- |
| 494.77 | 1.04 | 8.24 | -- | -- | -0.419 | -- | -- | -1.23 | -- | 31.9 | 12880 | -- | -- |
| 502.21 | 1.05 | 8.2 | -- | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 4 | 124.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 6 | 124.83 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 11 | 125.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 6 |
| 12 | 125.83 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 18 | 126.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 23 | 126.70 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 33 | 127.25 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 38 | 127.52 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 39 | 127.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 43 | 127.73 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 44 | 127.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 48 | 127.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 57 | 128.02 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 66 | 128.22 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 5 |
| 70 | 128.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 71 | 128.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 73 | 128.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 94 | 128.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 104 | 129.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 106 | 129.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 108 | 129.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 111 | 129.10 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 115 | 129.13 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 116 | 129.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 119 | 129.22 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 121 | 129.25 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 135 | 129.49 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 136 | 129.49 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 138 | 129.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 140 | 129.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 142 | 129.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 145 | 129.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 146 | 129.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 149 | 129.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 155 | 129.67 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 162 | 129.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 167 | 129.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 168 | 129.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 171 | 129.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 178 | 129.84 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 179 | 129.85 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 184 | 129.89 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 211 | 130.00 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 214 | 130.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 227 | 130.12 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 229 | 130.12 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 241 | 130.19 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 245 | 130.20 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 246 | 130.21 | wind | 1.0 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 249 | 130.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 251 | 130.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 252 | 130.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 255 | 130.25 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 256 | 130.26 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 268 | 130.30 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 305 | 130.42 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 323 | 130.50 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 325 | 130.51 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 333 | 130.53 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 335 | 130.53 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 338 | 130.54 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 364 | 130.60 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 369 | 130.60 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 9 | 15 |
| 374 | 130.61 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 376 | 130.62 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 16 |
| 391 | 130.65 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 454 | 130.79 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 460 | 130.80 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 3 | 10 |
| 480 | 130.81 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 507 | 130.88 | humidity | 70.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 537 | 130.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 541 | 130.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 543 | 130.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 567 | 130.98 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 3 | 20 |
| 569 | 130.99 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 626 | 131.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 634 | 131.07 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 643 | 131.08 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 650 | 131.09 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 675 | 131.13 | humidity | 70.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 741 | 131.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 745 | 131.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 802 | 131.29 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 7 | 8 |
| 836 | 131.33 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 858 | 131.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 861 | 131.35 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 865 | 131.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 934 | 131.42 | temperature | 30.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 948 | 131.44 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |