Os03g0263500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66).
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Os03g0263500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.22 | 0.206 | 10.6 | 0.902 | 0.2 | 0.679 | -0.00847 | -0.171 | 0.0882 | 18 | 24.2 | 17 | -- | -- |
| 19.28 | 0.204 | 10.6 | 0.883 | 0.204 | 0.693 | 2.07e-05 | -- | 0.0816 | 17.8 | 24.2 | 19 | -- | -- |
| 19.22 | 0.204 | 10.6 | 0.901 | 0.2 | 0.679 | -- | -0.169 | 0.088 | 18 | 24.2 | 16 | -- | -- |
| 19.27 | 0.204 | 10.6 | 0.88 | 0.201 | 0.696 | -- | -- | 0.0834 | 17.9 | 24.2 | 16 | -- | -- |
| 21.27 | 0.215 | 10.6 | 0.89 | -- | 0.671 | -- | -0.183 | 0.0821 | -- | 24.1 | 15 | -- | -- |
| 26.16 | 0.24 | 10.6 | 0.718 | 0.201 | -- | -0.0368 | -- | -0.0323 | 20.2 | -- | -- | -- | -- |
| 26.17 | 0.24 | 10.6 | 0.719 | 0.201 | -- | -- | -- | -0.0323 | 20.2 | -- | -- | -- | -- |
| 21.32 | 0.215 | 10.6 | 0.866 | -- | 0.668 | -- | -- | 0.0724 | -- | 24.1 | 15 | -- | -- |
| 37.82 | 0.286 | 10.6 | -- | 0.186 | 0.355 | -- | -- | -0.0654 | 19.3 | 24.1 | 10 | -- | -- |
| 28.41 | 0.249 | 10.6 | 0.718 | -- | -- | -- | -- | -0.0346 | -- | -- | -- | -- | -- |
| 39.81 | 0.295 | 10.6 | -- | 0.198 | -- | -- | -- | -0.112 | 20.5 | -- | -- | -- | -- |
| 39.58 | 0.294 | 10.6 | -- | -- | 0.379 | -- | -- | -0.0649 | -- | 23.9 | 6 | -- | -- |
| 42 | 0.303 | 10.6 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 19.22 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 3 | 19.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 6 | 19.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 19.27 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 8 | 19.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 21 | 19.38 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 24 | 19.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 26 | 19.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 27 | 19.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 29 | 19.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 34 | 19.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 43 | 19.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 50 | 19.48 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 174 | 19.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 239 | 20.08 | temperature | 25 | 270 | < th | dose dependent | sin | 15 | NA |
| 292 | 20.18 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 320 | 20.23 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 375 | 20.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 428 | 20.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 606 | 20.60 | temperature | 15 | 720 | > th | dose dependent | sin | 16 | NA |
| 744 | 20.78 | temperature | 25 | 90 | < th | dose dependent | rect. | 22 | 13 |
| 774 | 20.81 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 800 | 20.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 818 | 20.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 845 | 20.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 860 | 20.88 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 892 | 20.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 967 | 20.96 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |