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Os03g0261800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0299) R2 : 0.318
β1 : 1.19 (0.11) R2dD : 0.184 R2D : 0.181
β2 : 0.681 (0.0725) R2dC : 0.132 R2C : 0.139
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0965 (0.0639) R2dN8 : 0.00458 R2N8 : -0.00527
σ : 0.562
deviance : 144.28
__
_____
C
peak time of C : 1.99
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
126.35 0.528 13.4 1.33 0.746 -0.75 1.12 -0.789 0.232 1.88 20.81 1143 -- --
127.54 0.526 13.4 1.5 0.744 -0.659 0.962 -- 0.276 1.9 21.1 1119 -- --
130.77 0.533 13.4 1.38 0.751 -0.721 -- -0.413 0.249 1.8 20.9 1112 -- --
131.17 0.533 13.4 1.46 0.745 -0.668 -- -- 0.269 1.82 21.08 1112 -- --
152.41 0.575 13.4 1.36 -- -0.556 -- -0.379 0.271 -- 22.38 108 -- --
139.77 0.554 13.4 1.23 0.681 -- 1.09 -- 0.103 2.08 -- -- -- --
144.28 0.562 13.5 1.19 0.681 -- -- -- 0.0965 1.99 -- -- -- --
152.59 0.575 13.4 1.36 -- -0.537 -- -- 0.279 -- 22.6 72 -- --
179.51 0.624 13.5 -- 0.75 -0.257 -- -- 0.101 1.58 22.31 554 -- --
172.22 0.613 13.4 1.22 -- -- -- -- 0.112 -- -- -- -- --
181.82 0.631 13.5 -- 0.704 -- -- -- -0.0364 2.03 -- -- -- --
193.54 0.648 13.5 -- -- -0.484 -- -- 0.0353 -- 27.4 169 -- --
211.58 0.679 13.5 -- -- -- -- -- -0.0231 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 122.11 humidity 70 14400 > th dose dependent rect. 3 3
4 122.16 humidity 70 14400 > th dose dependent rect. 4 1
52 123.86 atmosphere 1005 90 > th dose dependent sin 17 NA
76 124.43 temperature 20 1440 > th dose independent rect. 23 1
85 124.72 atmosphere 1000 30 > th dose dependent rect. 11 14
90 124.84 temperature 20 1440 < th dose independent rect. 23 1
96 124.91 atmosphere 1005 90 > th dose dependent rect. 11 16
99 125.06 humidity 90 14400 < th dose dependent rect. 22 6
110 125.29 atmosphere 1005 30 > th dose independent rect. 11 14
111 125.33 atmosphere 995 30 > th dose dependent rect. 9 16
128 125.44 radiation 10 720 > th dose dependent rect. 16 1
133 125.50 radiation 10 720 > th dose dependent rect. 16 14
172 125.73 atmosphere 1005 10 > th dose dependent rect. 13 14
187 125.81 atmosphere 1005 10 > th dose dependent rect. 18 9
194 125.88 radiation 10 10 < th dose independent rect. 1 17
200 125.96 atmosphere 995 30 > th dose dependent rect. 7 18
215 126.07 atmosphere 1005 270 > th dose dependent rect. 11 12
216 126.08 temperature 20 720 > th dose independent rect. 6 1
264 126.35 humidity 90 4320 > th dose dependent rect. 18 1
265 126.36 radiation 10 720 > th dose independent rect. 16 14
267 126.38 radiation 10 720 > th dose independent rect. 16 2
285 126.44 wind 3 43200 < th dose independent rect. 23 1
292 126.48 atmosphere 1005 270 > th dose independent rect. 7 17
296 126.50 humidity 90 14400 < th dose dependent rect. 4 3
297 126.50 radiation 20 10 < th dose dependent rect. 1 17
300 126.51 atmosphere 1010 10 < th dose dependent rect. 12 17
327 126.61 temperature 30 90 < th dose dependent rect. 9 16
341 126.69 humidity 90 14400 < th dose dependent rect. 1 6
351 126.73 temperature 20 1440 > th dose independent rect. 20 11
352 126.74 wind 3 43200 > th dose independent rect. 23 1
355 126.75 humidity 90 14400 < th dose dependent rect. 23 1
364 126.78 temperature 30 30 < th dose dependent rect. 11 14
369 126.80 wind 3 4320 > th dose independent rect. 15 16
371 126.80 atmosphere 995 270 > th dose dependent rect. 7 16
379 126.83 temperature 20 1440 < th dose independent rect. 20 11
381 126.83 humidity 90 14400 < th dose dependent rect. 1 2
382 126.83 atmosphere 1000 30 > th dose dependent rect. 18 7
401 126.88 humidity 50 14400 > th dose dependent rect. 23 1
408 126.90 wind 1 4320 < th dose independent rect. 15 10
436 126.93 atmosphere 1015 30 < th dose dependent rect. 12 19
488 127.06 wind 1 4320 < th dose dependent rect. 15 9
527 127.15 atmosphere 1000 30 > th dose independent rect. 7 18
531 127.17 temperature 20 1440 < th dose independent rect. 6 1
541 127.20 temperature 30 90 < th dose dependent rect. 7 18
551 127.23 temperature 20 1440 < th dose dependent rect. 3 1
557 127.25 wind 3 4320 < th dose independent rect. 15 16
567 127.28 atmosphere 1005 270 > th dose dependent rect. 15 8
571 127.29 wind 1 4320 > th dose independent rect. 16 9
579 127.30 radiation 30 720 > th dose independent rect. 15 17
591 127.34 humidity 70 10 > th dose independent rect. 1 17
599 127.35 temperature 20 1440 > th dose independent rect. 1 1
619 127.39 humidity 80 1440 > th dose independent rect. 8 4
665 127.49 atmosphere 1005 270 > th dose independent rect. 17 7
668 127.49 humidity 80 14400 > th dose independent rect. 19 12
672 127.50 radiation 30 720 > th dose independent rect. 14 19
695 127.55 atmosphere 1000 30 > th dose dependent rect. 7 20
700 127.57 humidity 80 1440 < th dose independent rect. 8 4
710 127.58 radiation 20 720 > th dose dependent rect. 14 19
725 127.61 radiation 10 720 > th dose dependent rect. 15 17
726 127.62 humidity 80 1440 < th dose dependent rect. 9 1
780 127.71 atmosphere 1005 10 > th dose dependent rect. 9 21
797 127.74 wind 5 4320 < th dose dependent rect. 15 17
800 127.75 temperature 20 1440 > th dose independent sin 11 NA
807 127.76 radiation 10 10 < th dose independent sin 1 NA
812 127.77 temperature 25 720 < th dose dependent rect. 3 11
816 127.78 wind 7 4320 > th dose independent rect. 15 1
817 127.78 temperature 20 1440 < th dose independent rect. 1 1
823 127.79 wind 1 4320 < th dose independent rect. 15 13
825 127.80 humidity 70 10 > th dose independent rect. 1 14
847 127.83 humidity 80 14400 < th dose independent rect. 19 12
882 127.89 temperature 20 1440 < th dose independent sin 10 NA
934 127.97 radiation 20 720 < th dose independent sin 16 NA
937 127.97 wind 3 4320 < th dose dependent rect. 15 11
961 128.00 radiation 20 720 < th dose independent rect. 15 9
968 128.01 radiation 10 10 < th dose independent rect. 1 13
980 128.02 wind 9 4320 < th dose dependent rect. 13 19
984 128.03 temperature 25 720 < th dose dependent sin 4 NA
988 128.04 humidity 80 1440 < th dose independent rect. 9 1
990 128.04 radiation 10 10 < th dose independent rect. 3 15
999 128.05 wind 1 4320 > th dose dependent rect. 13 19