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Os03g0258200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0406) R2 : 0.741
β1 : -1.42 (0.182) R2dD : 0.0586 R2D : 0.12
β2 : 1.49 (0.118) R2dC : 0.15 R2C : 0.352
β3 : -1.98 (0.135) R2dE : 0.219 R2E : 0.45
β4 : 2.38 (0.38) R2dD*C : 0.0265 R2D*C : 0.0251
β5 : 4.02 (0.691) R2dD*E : 0.0341 R2D*E : 0.05
γ1 : 0.0412 (0.0924) R2dN8 : 0.000197 R2N8 : -0.00208
σ : 0.731
deviance : 241.75
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C
peak time of C : 23.7
E
wheather : temperature
threshold : 19.32
memory length : 655
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.63
open length of G : 1.55

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
241.75 0.731 10.8 -1.42 1.49 -1.98 2.38 4.02 0.0412 23.7 19.32 655 4.63 1.55
257.87 0.748 10.8 -1.98 1.57 -1.84 1.83 -- -0.201 23.7 19.92 634 5.08 0.833
265.27 0.759 10.7 -1.42 1.54 -1.97 -- 4.07 0.0652 23.7 19.71 648 4.67 1.47
267.75 0.762 10.8 -2.12 1.54 -1.88 -- -- -0.174 23.7 19.97 633 5.13 0.75
309.25 0.819 10.7 -1.91 -- -2.66 -- -0.103 0.0104 -- 14.08 588 3.67 4.85
359.67 0.889 10.9 -2.3 2.57 -- 1.97 -- -0.534 23.2 -- -- -- --
376.32 0.908 10.9 -2.39 2.56 -- -- -- -0.541 23.2 -- -- -- --
287.15 0.789 10.8 -1.83 -- -3.16 -- -- -0.134 -- 13 607 3.58 5.07
384.63 0.913 10.7 -- 1.48 -2.18 -- -- 0.132 23.9 20 643 4.94 0.789
786.03 1.31 10.9 -2.32 -- -- -- -- -0.519 -- -- -- -- --
526.27 1.07 10.9 -- 2.54 -- -- -- -0.275 23.1 -- -- -- --
390.6 0.92 10.7 -- -- -3.4 -- -- 0.0847 -- 14.82 614 3.37 5.36
928.49 1.42 10.8 -- -- -- -- -- -0.261 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 253.33 temperature 25 270 > th dose independent rect. 5 8
3 255.14 temperature 20 720 > th dose dependent rect. 4 2
9 259.61 temperature 20 720 > th dose independent rect. 4 2
14 261.28 temperature 25 10 > th dose dependent rect. 5 11
15 261.46 temperature 20 270 > th dose dependent rect. 3 10
16 261.52 temperature 25 90 > th dose dependent rect. 5 10
33 263.20 temperature 25 10 > th dose dependent rect. 21 19
47 264.26 temperature 25 90 > th dose dependent rect. 20 19
50 264.87 temperature 25 90 > th dose dependent sin 4 NA
79 267.25 temperature 25 10 > th dose dependent sin 3 NA
126 270.23 temperature 25 270 > th dose dependent sin 7 NA
174 273.61 temperature 25 270 > th dose independent sin 4 NA
212 276.14 temperature 25 270 < th dose independent sin 3 NA
227 276.69 temperature 25 270 < th dose independent rect. 6 9
315 282.73 temperature 25 270 > th dose independent rect. 10 1
323 283.06 temperature 25 270 < th dose independent rect. 6 5
348 284.45 temperature 20 720 < th dose independent rect. 3 2
468 288.99 temperature 25 270 < th dose independent rect. 3 12
552 291.58 temperature 25 720 < th dose dependent rect. 2 5
553 291.62 temperature 25 270 < th dose independent rect. 24 15
610 293.03 temperature 25 10 > th dose dependent rect. 5 19
611 293.05 temperature 25 10 > th dose dependent rect. 5 17
629 293.35 temperature 30 720 < th dose dependent rect. 24 9
644 293.49 temperature 25 10 > th dose dependent rect. 23 23
652 293.57 temperature 25 10 > th dose dependent no NA NA
797 296.27 temperature 25 720 < th dose dependent rect. 5 2
917 298.70 temperature 30 270 < th dose dependent rect. 24 15