Os03g0257700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0257700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 266.3 | 0.767 | 3.35 | 2.3 | 1.08 | -1.31 | 2.03 | 2.01 | 0.846 | 0.31 | 25.1 | 1385 | -- | -- |
| 268.25 | 0.763 | 3.4 | 1.83 | 1.06 | -1.11 | 2.19 | -- | 0.788 | 0.208 | 23.11 | 1419 | -- | -- |
| 276.93 | 0.775 | 3.33 | 2.5 | 1.39 | -1.73 | -- | 3.74 | 0.989 | 23.3 | 23.1 | 876 | -- | -- |
| 285.47 | 0.787 | 3.4 | 1.7 | 1.33 | -1.44 | -- | -- | 0.798 | 23.5 | 22.96 | 897 | -- | -- |
| 317.71 | 0.835 | 3.4 | 1.44 | -- | -1.63 | -- | -1.05 | 0.764 | -- | 23.1 | 876 | -- | -- |
| 318.05 | 0.836 | 3.45 | 1.35 | 0.962 | -- | 1.94 | -- | 0.573 | 0.0718 | -- | -- | -- | -- |
| 334.3 | 0.856 | 3.46 | 1.28 | 0.956 | -- | -- | -- | 0.563 | 0.256 | -- | -- | -- | -- |
| 307.79 | 0.821 | 3.37 | 1.66 | -- | -1.86 | -- | -- | 0.87 | -- | 21.33 | 1630 | -- | -- |
| 352.36 | 0.874 | 3.48 | -- | 1.21 | -0.988 | -- | -- | 0.495 | 23.6 | 24.9 | 865 | -- | -- |
| 391.82 | 0.925 | 3.44 | 1.31 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 377.26 | 0.909 | 3.49 | -- | 0.974 | -- | -- | -- | 0.421 | 0.326 | -- | -- | -- | -- |
| 377.79 | 0.908 | 3.42 | -- | -- | -1.53 | -- | -- | 0.641 | -- | 21.33 | 1630 | -- | -- |
| 436.96 | 0.976 | 3.47 | -- | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 2 | 263.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 3 | 263.77 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 4 | 263.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 6 |
| 5 | 263.97 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 8 | 264.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 12 | 264.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 24 | 264.42 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 45 | 264.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 48 | 264.69 | temperature | 20 | 720 | > th | dose dependent | sin | 21 | NA |
| 67 | 265.04 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 134 | 265.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 136 | 265.50 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 243 | 266.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 260 | 266.17 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 280 | 266.24 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 15 |
| 290 | 266.28 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 308 | 266.32 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 314 | 266.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 341 | 266.38 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 410 | 266.60 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 418 | 266.62 | temperature | 30 | 720 | < th | dose dependent | sin | 21 | NA |
| 471 | 266.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 672 | 267.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 712 | 267.61 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 731 | 267.65 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 735 | 267.66 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 762 | 267.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 878 | 268.03 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 905 | 268.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 945 | 268.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 971 | 268.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 976 | 268.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |