Os03g0254400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os03g0254400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.23 | 0.336 | 9.05 | 1.27 | 0.773 | -0.0954 | -0.421 | 2.92 | -0.4 | 7.55 | 30.01 | 1311 | -- | -- |
| 52.31 | 0.337 | 9.12 | 0.715 | 0.817 | 0.252 | -0.287 | -- | -0.419 | 7.35 | 32.1 | 4794 | -- | -- |
| 51.72 | 0.335 | 9.05 | 1.27 | 0.772 | -0.0991 | -- | 2.95 | -0.399 | 7.54 | 30 | 1310 | -- | -- |
| 52.38 | 0.337 | 9.11 | 0.653 | 0.816 | 0.25 | -- | -- | -0.444 | 7.36 | 29.9 | 4898 | -- | -- |
| 83.37 | 0.425 | 9.05 | 1.36 | -- | -0.164 | -- | 3.39 | -0.377 | -- | 30.01 | 1408 | -- | -- |
| 54.95 | 0.348 | 9.13 | 0.742 | 0.786 | -- | -0.418 | -- | -0.476 | 7.41 | -- | -- | -- | -- |
| 55.43 | 0.349 | 9.13 | 0.732 | 0.785 | -- | -- | -- | -0.475 | 7.37 | -- | -- | -- | -- |
| 85.5 | 0.431 | 9.17 | 0.64 | -- | 0.251 | -- | -- | -0.545 | -- | 27.84 | 7139 | -- | -- |
| 57.34 | 0.353 | 9.19 | -- | 0.789 | 0.509 | -- | -- | -0.756 | 7.44 | 26.11 | 47520 | -- | -- |
| 88.27 | 0.439 | 9.15 | 0.745 | -- | -- | -- | -- | -0.462 | -- | -- | -- | -- | -- |
| 69.56 | 0.39 | 9.15 | -- | 0.792 | -- | -- | -- | -0.557 | 7.31 | -- | -- | -- | -- |
| 88.84 | 0.439 | 9.21 | -- | -- | 0.552 | -- | -- | -0.733 | -- | 21.59 | 47520 | -- | -- |
| 102.91 | 0.473 | 9.17 | -- | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.22 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 2 | 50.23 | humidity | 70 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 4 | 50.26 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 8 | 50.32 | temperature | 25 | 10 | > th | dose independent | rect. | 12 | 23 |
| 10 | 50.33 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 11 | 50.35 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 2 |
| 18 | 50.37 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 20 | 50.38 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 21 | 50.38 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 23 | 50.39 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 53 | 50.44 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 55 | 50.44 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 8 |
| 56 | 50.44 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 67 | 50.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 94 | 50.50 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 18 |
| 164 | 50.57 | humidity | 60 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 171 | 50.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 219 | 50.59 | humidity | 80 | 14400 | < th | dose dependent | sin | 21 | NA |
| 242 | 50.60 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 10 |
| 259 | 50.61 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 347 | 50.64 | humidity | 60 | 14400 | > th | dose independent | sin | 20 | NA |
| 412 | 50.66 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 468 | 50.67 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 17 |
| 587 | 50.69 | humidity | 70 | 14400 | < th | dose independent | sin | 5 | NA |
| 591 | 50.69 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 618 | 50.69 | humidity | 80 | 14400 | < th | dose dependent | no | NA | NA |
| 619 | 50.69 | wind | 3 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 743 | 50.71 | humidity | 80 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 746 | 50.72 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 1 |
| 777 | 50.73 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 877 | 50.74 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 909 | 50.74 | humidity | 50 | 14400 | > th | dose dependent | sin | 22 | NA |
| 934 | 50.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 938 | 50.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 11 |