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Os03g0251700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.59 (0.0289) R2 : 0.902
β1 : 0.762 (0.106) R2dD : 0.0112 R2D : 0.00244
β2 : 4.4 (0.072) R2dC : 0.806 R2C : 0.761
β3 : -2.21 (0.0893) R2dE : 0.136 R2E : 0.0879
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.0618) R2dN8 : 0.000665 R2N8 : -0.00781
σ : 0.538
deviance : 133.49
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C
peak time of C : 20.8
E
wheather : temperature
threshold : 8.051
memory length : 100
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.97
open length of G : 18.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
124.92 0.525 8.57 0.936 4.39 -2.3 -0.525 2.35 0.155 20.8 9.858 99 4.95 18.8
132.2 0.536 8.6 0.802 4.38 -2.22 -0.771 -- 0.115 20.8 8.749 96 4.98 18.7
125.82 0.522 8.57 0.953 4.38 -2.3 -- 2.39 0.155 20.8 9.706 99 4.95 18.7
133.49 0.538 8.59 0.762 4.4 -2.21 -- -- 0.101 20.8 8.051 100 4.97 18.7
298.72 0.809 8.41 0.826 -- -4.33 -- 2.22 0.349 -- 7.784 12 4.9 10.9
192.64 0.651 8.64 0.445 4.39 -- -0.906 -- -0.12 22 -- -- -- --
195.86 0.655 8.64 0.481 4.39 -- -- -- -0.118 22 -- -- -- --
269.4 0.764 8.51 0.65 -- -4.34 -- -- 0.122 -- 5.163 30 4.73 10.9
147.42 0.565 8.62 -- 4.38 -2.04 -- -- 0.0156 20.8 6.795 97 5.1 18.5
1358.59 1.72 8.52 0.537 -- -- -- -- -0.114 -- -- -- -- --
201.96 0.665 8.65 -- 4.39 -- -- -- -0.171 22.1 -- -- -- --
253.64 0.742 8.53 -- -- -3.88 -- -- -0.0529 -- -15.9 79 4.37 10.8
1366.19 1.73 8.53 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.17 temperature 10.0 90 > th dose dependent rect. 5 19
64 143.23 radiation 1.0 30 > th dose independent sin 3 NA
65 143.24 radiation 1.0 30 < th dose independent sin 3 NA
66 143.30 radiation 1.0 30 < th dose dependent sin 3 NA
85 145.13 radiation 1.0 30 < th dose independent rect. 24 17
93 145.73 radiation 10.0 10 < th dose dependent rect. 24 17
101 146.17 radiation 1.0 90 < th dose dependent rect. 23 20
102 146.22 temperature 30.0 10 < th dose dependent rect. 24 19
151 148.30 temperature 10.0 270 > th dose dependent rect. 3 8
159 148.66 temperature 10.0 10 > th dose dependent rect. 5 9
177 149.31 temperature 20.0 30 > th dose independent rect. 5 19
178 149.35 temperature 15.0 270 > th dose independent rect. 3 20
182 149.45 radiation 1.0 30 < th dose independent rect. 2 15
187 149.58 temperature 15.0 270 > th dose independent rect. 4 18
225 150.52 radiation 1.0 30 < th dose dependent rect. 2 16
241 150.87 radiation 1.0 30 < th dose independent rect. 24 7
269 151.49 radiation 1.0 30 < th dose independent rect. 24 12
275 151.62 precipitation 0.1 270 < th dose independent rect. 3 20
276 151.62 precipitation 0.1 270 < th dose dependent rect. 3 20
316 152.40 temperature 10.0 270 > th dose independent rect. 23 4
317 152.40 temperature 30.0 270 < th dose independent rect. 23 4
318 152.40 humidity 50.0 270 > th dose independent rect. 23 4
321 152.40 atmosphere 995.0 270 > th dose independent rect. 23 4
322 152.40 radiation 1.0 270 < th dose independent rect. 23 4
328 152.40 radiation 1.0 270 < th dose dependent rect. 23 4
333 152.42 wind 9.0 270 < th dose independent rect. 23 4
343 152.57 precipitation 0.1 270 < th dose independent rect. 23 4
344 152.57 precipitation 0.1 270 < th dose dependent rect. 23 4
355 152.71 temperature 15.0 270 > th dose independent rect. 3 8
356 152.73 radiation 10.0 10 < th dose dependent rect. 24 6
364 152.92 atmosphere 1015.0 270 < th dose independent rect. 23 4
367 152.98 precipitation 0.1 270 < th dose independent rect. 4 18
368 152.98 precipitation 0.1 270 < th dose dependent rect. 4 18
372 153.03 temperature 20.0 30 > th dose independent rect. 5 9
380 153.09 atmosphere 995.0 270 > th dose dependent rect. 23 4
382 153.10 radiation 1.0 30 > th dose independent rect. 17 23
393 153.17 humidity 60.0 270 > th dose independent rect. 3 8
400 153.30 wind 9.0 270 < th dose independent rect. 22 6
401 153.30 temperature 10.0 270 > th dose independent rect. 22 6
402 153.30 temperature 30.0 270 < th dose independent rect. 22 6
403 153.30 humidity 50.0 270 > th dose independent rect. 22 6
406 153.30 atmosphere 995.0 270 > th dose independent rect. 22 6
407 153.30 radiation 1.0 270 < th dose independent rect. 22 6
413 153.30 radiation 1.0 270 < th dose dependent rect. 22 6
456 153.76 radiation 1.0 30 > th dose independent rect. 17 21
460 153.78 wind 9.0 270 < th dose independent rect. 3 20
491 154.32 humidity 50.0 270 > th dose dependent rect. 23 4
498 154.37 precipitation 0.1 270 < th dose independent rect. 22 6
499 154.37 precipitation 0.1 270 < th dose dependent rect. 22 6
505 154.46 wind 9.0 270 < th dose independent rect. 4 18
523 154.67 atmosphere 1015.0 270 < th dose independent rect. 22 6
525 154.70 precipitation 0.1 270 < th dose independent rect. 3 8
526 154.70 precipitation 0.1 270 < th dose dependent rect. 3 8
544 154.90 temperature 15.0 270 > th dose independent rect. 3 10
619 155.67 temperature 30.0 10 < th dose dependent rect. 9 21
626 155.72 radiation 1.0 30 > th dose independent rect. 5 9
638 155.73 wind 9.0 270 < th dose independent rect. 11 16
649 155.85 temperature 10.0 270 > th dose dependent rect. 23 4
652 155.89 atmosphere 1015.0 270 < th dose independent rect. 4 18
654 155.91 wind 7.0 270 < th dose independent rect. 3 8
658 155.94 atmosphere 1010.0 90 < th dose independent rect. 5 8
659 155.94 temperature 30.0 90 < th dose independent rect. 13 16
676 156.08 wind 9.0 270 < th dose dependent rect. 23 4
680 156.10 atmosphere 995.0 270 > th dose independent rect. 3 8
681 156.10 atmosphere 1015.0 270 < th dose independent rect. 3 8
682 156.10 temperature 10.0 270 > th dose independent rect. 11 16
704 156.31 humidity 50.0 270 > th dose dependent rect. 22 6
716 156.48 humidity 50.0 270 > th dose independent rect. 3 10
773 156.70 humidity 50.0 90 > th dose independent rect. 5 8
777 156.73 temperature 25.0 10 < th dose independent rect. 24 18
830 157.33 temperature 30.0 90 < th dose dependent rect. 11 8
833 157.36 wind 1.0 270 > th dose independent rect. 23 4
858 157.55 radiation 40.0 90 < th dose independent rect. 13 16
873 157.57 humidity 50.0 90 > th dose dependent rect. 13 16
885 157.60 atmosphere 1015.0 270 < th dose independent rect. 3 20
890 157.62 atmosphere 995.0 270 > th dose independent rect. 11 16
938 157.77 temperature 10.0 720 > th dose dependent rect. 3 13
951 157.84 precipitation 0.1 270 < th dose independent rect. 3 10
953 157.84 precipitation 0.1 270 < th dose dependent rect. 3 10
994 158.16 wind 9.0 90 < th dose independent rect. 5 8
996 158.17 precipitation 0.1 270 < th dose independent rect. 11 16
999 158.17 precipitation 0.1 270 < th dose dependent rect. 11 16