Os03g0250400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os03g0250400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 481.58 | 1.03 | 3.36 | -0.582 | 0.459 | -1.75 | 0.92 | 1.04 | -0.119 | 8.22 | 33.1 | 1461 | -- | -- |
| 481.62 | 1.02 | 3.34 | -0.425 | 0.457 | -1.63 | 0.926 | -- | -0.12 | 8.21 | 33.1 | 1460 | -- | -- |
| 484.17 | 1.02 | 3.36 | -0.549 | 0.457 | -1.74 | -- | 0.997 | -0.12 | 8.31 | 33.11 | 1460 | -- | -- |
| 484.19 | 1.02 | 3.34 | -0.386 | 0.457 | -1.63 | -- | -- | -0.118 | 8.31 | 33.11 | 1460 | -- | -- |
| 495.69 | 1.04 | 3.35 | -0.343 | -- | -1.6 | -- | -0.159 | -0.118 | -- | 33.13 | 1460 | -- | -- |
| 609.52 | 1.16 | 3.4 | 0.00981 | 0.462 | -- | 1.07 | -- | -0.418 | 6.73 | -- | -- | -- | -- |
| 612.41 | 1.16 | 3.41 | 0.0274 | 0.465 | -- | -- | -- | -0.42 | 6.77 | -- | -- | -- | -- |
| 495.68 | 1.04 | 3.35 | -0.379 | -- | -1.62 | -- | -- | -0.116 | -- | 33.13 | 1460 | -- | -- |
| 488 | 1.03 | 3.33 | -- | 0.452 | -1.58 | -- | -- | -0.0872 | 8.32 | 33.17 | 1460 | -- | -- |
| 623.73 | 1.17 | 3.42 | 0.0378 | -- | -- | -- | -- | -0.411 | -- | -- | -- | -- | -- |
| 612.43 | 1.16 | 3.41 | -- | 0.466 | -- | -- | -- | -0.424 | 6.77 | -- | -- | -- | -- |
| 499.36 | 1.04 | 3.34 | -- | -- | -1.57 | -- | -- | -0.0855 | -- | 33.1 | 1460 | -- | -- |
| 623.77 | 1.17 | 3.42 | -- | -- | -- | -- | -- | -0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 476.94 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 17 | 478.14 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 18 | 478.17 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 31 | 478.30 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 46 | 478.41 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 89 | 480.95 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 119 | 481.32 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 159 | 482.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 163 | 482.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 166 | 482.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 170 | 482.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 172 | 482.89 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 181 | 483.05 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 183 | 483.10 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 216 | 483.46 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 222 | 483.64 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 267 | 484.23 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 285 | 484.59 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 440 | 485.46 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 482 | 486.03 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 483 | 486.04 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 491 | 486.28 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 496 | 486.34 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 541 | 487.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 578 | 487.46 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 583 | 487.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 587 | 487.56 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 640 | 488.64 | temperature | 30 | 1440 | > th | dose independent | sin | 11 | NA |
| 664 | 488.99 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 685 | 489.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 708 | 489.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 716 | 489.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 732 | 490.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 766 | 490.43 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 867 | 491.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 882 | 491.22 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 889 | 491.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 890 | 491.26 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 929 | 491.39 | temperature | 30 | 14400 | > th | dose dependent | sin | 12 | NA |
| 936 | 491.46 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 984 | 491.65 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 992 | 491.70 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 18 |