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Os03g0249900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0133) R2 : 0.656
β1 : -1.05 (0.0488) R2dD : 0.363 R2D : 0.307
β2 : 0.611 (0.0323) R2dC : 0.27 R2C : 0.273
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.243 (0.0284) R2dN8 : 0.0741 R2N8 : 0.00785
σ : 0.251
deviance : 28.62
__
_____
C
peak time of C : 14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.18 0.231 9.65 -1.05 0.357 0.535 -0.525 0.753 -0.268 14.4 7.042 114 -- --
24.64 0.231 9.64 -1.04 0.342 0.519 -0.146 -- -0.265 14.9 2.268 110 -- --
24.58 0.231 9.65 -1.06 0.321 0.572 -- 0.203 -0.272 15.1 2.771 106 -- --
24.58 0.231 9.65 -1.05 0.336 0.561 -- -- -0.27 15.2 2.139 90 -- --
27.13 0.243 9.65 -1.07 -- 0.814 -- 0.255 -0.289 -- -8.658 167 -- --
28.46 0.25 9.64 -1.04 0.611 -- -0.209 -- -0.242 14 -- -- -- --
28.62 0.251 9.64 -1.05 0.611 -- -- -- -0.243 14 -- -- -- --
27.28 0.243 9.65 -1.07 -- 0.808 -- -- -0.289 -- -8.487 167 -- --
53.7 0.341 9.62 -- 0.364 0.554 -- -- -0.151 15.2 2.58 85 -- --
51.07 0.334 9.65 -1.08 -- -- -- -- -0.258 -- -- -- -- --
57.68 0.355 9.61 -- 0.631 -- -- -- -0.126 14.1 -- -- -- --
57.49 0.353 9.63 -- -- 0.854 -- -- -0.172 -- -9.363 128 -- --
81.57 0.422 9.62 -- -- -- -- -- -0.138 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.82 radiation 20.0 270 < th dose dependent rect. 2 15
15 21.40 radiation 40.0 90 < th dose dependent rect. 4 14
17 21.43 temperature 10.0 30 > th dose dependent rect. 9 19
24 21.51 radiation 40.0 90 < th dose dependent rect. 13 20
25 21.52 radiation 10.0 270 < th dose independent rect. 2 15
38 21.68 radiation 40.0 270 < th dose independent rect. 11 20
51 21.76 wind 7.0 270 < th dose independent rect. 17 10
52 21.76 radiation 40.0 270 < th dose independent rect. 12 18
57 21.81 wind 7.0 270 < th dose independent rect. 6 21
59 21.82 radiation 40.0 90 < th dose independent rect. 4 15
62 21.83 radiation 20.0 90 < th dose independent rect. 4 14
63 21.83 radiation 20.0 270 < th dose dependent sin 5 NA
65 21.86 wind 7.0 270 < th dose independent rect. 7 19
71 21.89 radiation 10.0 270 < th dose dependent sin 3 NA
89 21.99 wind 9.0 270 < th dose independent rect. 5 23
96 22.02 precipitation 0.1 270 < th dose independent rect. 6 21
97 22.02 precipitation 0.1 270 < th dose dependent rect. 6 21
98 22.03 radiation 10.0 270 < th dose independent rect. 2 5
101 22.04 precipitation 0.1 90 < th dose independent rect. 8 20
102 22.04 precipitation 0.1 90 < th dose dependent rect. 8 20
108 22.07 humidity 60.0 90 > th dose dependent rect. 4 15
115 22.09 temperature 10.0 90 > th dose dependent rect. 4 4
123 22.14 radiation 40.0 270 < th dose independent rect. 2 15
139 22.17 radiation 20.0 270 < th dose dependent rect. 2 6
141 22.18 radiation 30.0 90 < th dose dependent sin 2 NA
145 22.19 precipitation 0.1 270 < th dose independent rect. 17 10
147 22.19 radiation 10.0 270 < th dose dependent rect. 3 4
148 22.19 precipitation 0.1 270 < th dose dependent rect. 17 10
153 22.21 temperature 10.0 10 > th dose dependent rect. 9 17
155 22.22 atmosphere 995.0 270 > th dose independent rect. 13 17
157 22.22 temperature 10.0 270 > th dose dependent rect. 4 1
176 22.28 humidity 80.0 90 > th dose independent rect. 4 15
188 22.30 radiation 40.0 10 < th dose dependent rect. 13 20
189 22.31 radiation 1.0 90 > th dose independent rect. 8 7
194 22.32 radiation 10.0 270 < th dose independent rect. 3 3
197 22.32 temperature 10.0 270 > th dose dependent rect. 2 5
200 22.33 humidity 50.0 270 > th dose dependent rect. 3 3
203 22.34 precipitation 0.1 270 < th dose independent rect. 3 3
205 22.34 radiation 30.0 10 < th dose independent rect. 13 19
209 22.34 precipitation 0.1 270 < th dose dependent rect. 3 3
214 22.35 temperature 15.0 270 > th dose independent rect. 3 14
229 22.37 humidity 80.0 270 > th dose independent rect. 4 1
234 22.37 humidity 50.0 270 > th dose dependent rect. 4 1
237 22.38 precipitation 0.1 270 < th dose independent rect. 4 1
238 22.38 wind 9.0 270 < th dose independent rect. 3 3
239 22.38 temperature 10.0 270 > th dose independent rect. 3 3
241 22.38 temperature 30.0 270 < th dose independent rect. 3 3
242 22.38 humidity 50.0 270 > th dose independent rect. 3 3
245 22.38 atmosphere 995.0 270 > th dose independent rect. 3 3
246 22.38 atmosphere 1010.0 270 < th dose independent rect. 3 3
253 22.38 temperature 10.0 270 > th dose independent rect. 6 21
256 22.38 precipitation 0.1 270 < th dose dependent rect. 4 1
274 22.41 wind 9.0 270 < th dose independent rect. 4 1
275 22.41 temperature 10.0 270 > th dose independent rect. 4 1
277 22.41 temperature 30.0 270 < th dose independent rect. 4 1
278 22.41 humidity 50.0 270 > th dose independent rect. 4 1
281 22.41 atmosphere 995.0 270 > th dose independent rect. 4 1
282 22.41 atmosphere 1010.0 270 < th dose independent rect. 4 1
284 22.41 radiation 1.0 270 < th dose independent rect. 4 1
289 22.41 radiation 30.0 90 < th dose independent rect. 4 5
296 22.41 temperature 10.0 270 > th dose independent rect. 5 23
297 22.41 radiation 10.0 270 < th dose dependent rect. 4 1
305 22.42 precipitation 0.1 270 < th dose independent rect. 2 5
306 22.42 atmosphere 995.0 270 > th dose independent rect. 2 15
309 22.42 precipitation 0.1 270 < th dose dependent rect. 2 5
312 22.43 humidity 50.0 270 > th dose independent rect. 6 7
316 22.44 humidity 70.0 270 > th dose independent rect. 2 5
319 22.44 wind 9.0 270 < th dose dependent rect. 3 3
320 22.44 humidity 50.0 270 > th dose dependent rect. 2 5
326 22.45 atmosphere 1010.0 270 < th dose independent rect. 2 5
331 22.45 radiation 30.0 4320 < th dose dependent rect. 21 8
334 22.46 wind 9.0 270 < th dose independent rect. 2 5
335 22.46 temperature 10.0 270 > th dose independent rect. 2 5
337 22.46 temperature 30.0 270 < th dose independent rect. 2 5
338 22.46 humidity 50.0 270 > th dose independent rect. 2 5
340 22.46 atmosphere 995.0 270 > th dose independent rect. 2 5
344 22.46 temperature 10.0 270 > th dose independent rect. 6 7
345 22.46 atmosphere 995.0 270 > th dose independent rect. 6 7
346 22.46 atmosphere 1015.0 270 < th dose independent rect. 6 7
347 22.46 precipitation 0.1 270 < th dose independent rect. 6 7
349 22.46 temperature 10.0 270 > th dose independent rect. 13 17
350 22.46 temperature 10.0 270 > th dose independent rect. 7 19
354 22.46 precipitation 0.1 270 < th dose dependent rect. 6 7
360 22.47 temperature 10.0 90 > th dose dependent rect. 8 6
374 22.48 wind 9.0 270 < th dose independent rect. 6 7
406 22.51 temperature 10.0 270 > th dose independent rect. 17 10
407 22.51 radiation 20.0 270 < th dose independent rect. 17 10
411 22.51 atmosphere 1015.0 270 < th dose independent rect. 3 14
423 22.52 wind 9.0 270 < th dose dependent rect. 4 1
425 22.52 radiation 40.0 10 < th dose dependent rect. 5 15
453 22.56 wind 3.0 270 < th dose independent rect. 4 1
471 22.57 temperature 15.0 90 > th dose independent rect. 15 17
476 22.58 radiation 1.0 10 > th dose independent rect. 8 7
477 22.58 precipitation 0.1 90 < th dose independent rect. 8 7
481 22.58 precipitation 0.1 90 < th dose dependent rect. 8 7
513 22.62 atmosphere 995.0 90 > th dose independent rect. 15 17
517 22.63 radiation 10.0 270 < th dose independent sin 5 NA
524 22.64 temperature 10.0 90 > th dose independent rect. 8 7
525 22.64 atmosphere 1015.0 90 < th dose independent rect. 8 7
533 22.64 wind 9.0 270 < th dose dependent rect. 2 5
555 22.66 radiation 20.0 90 < th dose independent sin 3 NA
558 22.66 wind 1.0 90 > th dose independent rect. 8 7
601 22.68 radiation 40.0 10 < th dose independent rect. 4 16
637 22.70 humidity 50.0 90 > th dose dependent rect. 4 5
650 22.71 atmosphere 1000.0 10 > th dose independent rect. 13 20
654 22.71 radiation 40.0 270 < th dose dependent rect. 17 10
693 22.74 temperature 10.0 270 > th dose dependent rect. 8 3
711 22.75 temperature 10.0 10 > th dose dependent rect. 9 6
755 22.78 wind 1.0 30 > th dose independent rect. 9 19
780 22.79 wind 9.0 270 < th dose independent rect. 13 17
781 22.79 temperature 15.0 10 > th dose independent rect. 15 17
792 22.79 radiation 1.0 90 > th dose dependent rect. 8 6
801 22.80 wind 9.0 270 < th dose independent rect. 3 14
806 22.80 temperature 10.0 10 > th dose dependent rect. 2 7
830 22.82 precipitation 0.1 270 < th dose independent rect. 2 15
835 22.82 temperature 20.0 10 > th dose dependent rect. 9 6
837 22.82 precipitation 0.1 270 < th dose dependent rect. 2 15
845 22.83 humidity 50.0 270 > th dose independent rect. 17 9
850 22.83 radiation 40.0 10 < th dose dependent sin 1 NA
861 22.84 temperature 10.0 1440 > th dose independent rect. 5 5
864 22.84 atmosphere 995.0 1440 > th dose independent rect. 5 5
865 22.84 atmosphere 1015.0 1440 < th dose independent rect. 5 5
869 22.84 temperature 10.0 1440 > th dose independent rect. 10 19
896 22.85 atmosphere 1000.0 10 > th dose independent rect. 15 17
986 22.89 temperature 15.0 10 > th dose dependent rect. 9 15