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Os03g0249300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nucleotide-sensitive chloride conductance regulator family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0164) R2 : 0.74
β1 : 0.903 (0.0602) R2dD : 0.133 R2D : 0.0799
β2 : 1.37 (0.0418) R2dC : 0.611 R2C : 0.574
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.319 (0.0351) R2dN8 : 0.0633 R2N8 : 0.00849
σ : 0.309
deviance : 43.62
__
_____
C
peak time of C : 16
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.21 0.294 10.7 0.867 1.23 0.326 -0.282 -0.00286 0.318 16.6 20 10 -- --
39.21 0.292 10.7 0.867 1.23 0.326 -0.282 -- 0.318 16.6 20 9 -- --
39.41 0.292 10.7 0.854 1.23 0.33 -- -0.0251 0.315 16.6 20.02 9 -- --
39.42 0.292 10.7 0.864 1.23 0.332 -- -- 0.317 16.6 20.02 9 -- --
43.27 0.306 10.7 0.916 -- 1.36 -- -0.478 0.285 -- 0.9772 514 -- --
43.33 0.309 10.6 0.907 1.37 -- -0.316 -- 0.321 15.9 -- -- -- --
43.62 0.309 10.7 0.903 1.37 -- -- -- 0.319 16 -- -- -- --
42.75 0.305 10.7 0.789 -- 1.34 -- -- 0.261 -- 0.29 506 -- --
59.14 0.358 10.7 -- 1.24 0.341 -- -- 0.224 16.6 20.04 9 -- --
145.72 0.564 10.6 0.847 -- -- -- -- 0.283 -- -- -- -- --
65.11 0.377 10.7 -- 1.35 -- -- -- 0.219 16 -- -- -- --
58.35 0.356 10.6 -- -- 1.38 -- -- 0.205 -- 0.000723 516 -- --
164.64 0.599 10.7 -- -- -- -- -- 0.189 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.30 atmosphere 1005.0 10 > th dose dependent rect. 2 7
4 32.62 atmosphere 1005.0 270 > th dose dependent rect. 2 4
11 32.94 temperature 10.0 10 > th dose dependent rect. 9 19
28 33.43 atmosphere 1005.0 270 > th dose dependent rect. 4 1
31 33.50 temperature 10.0 30 > th dose dependent rect. 9 17
43 33.79 atmosphere 1005.0 270 > th dose independent rect. 2 5
55 34.00 temperature 10.0 270 > th dose dependent rect. 7 18
59 34.06 atmosphere 1005.0 270 > th dose independent rect. 3 3
66 34.09 radiation 1.0 270 < th dose dependent rect. 3 15
70 34.16 radiation 1.0 270 < th dose independent rect. 3 15
73 34.21 temperature 10.0 30 > th dose dependent rect. 7 21
76 34.24 temperature 30.0 90 < th dose dependent rect. 3 18
93 34.46 atmosphere 1005.0 30 > th dose independent rect. 4 5
96 34.47 wind 1.0 270 > th dose independent rect. 2 5
148 34.99 wind 5.0 270 < th dose independent rect. 2 4
154 35.05 precipitation 0.1 270 < th dose independent rect. 6 20
157 35.05 precipitation 0.1 270 < th dose dependent rect. 6 20
177 35.19 wind 7.0 270 < th dose independent rect. 7 19
180 35.20 radiation 1.0 270 < th dose independent sin 2 NA
183 35.22 radiation 1.0 270 < th dose dependent sin 2 NA
195 35.36 precipitation 0.1 270 < th dose independent rect. 2 4
197 35.36 precipitation 0.1 270 < th dose dependent rect. 2 4
225 35.51 wind 5.0 30 < th dose independent rect. 4 5
226 35.51 radiation 10.0 270 < th dose independent rect. 2 5
233 35.53 radiation 20.0 270 < th dose dependent rect. 2 5
238 35.54 wind 7.0 30 < th dose independent rect. 9 19
241 35.54 temperature 10.0 10 > th dose dependent rect. 9 15
255 35.57 precipitation 0.1 30 < th dose independent rect. 9 19
257 35.57 precipitation 0.1 30 < th dose dependent rect. 9 19
264 35.61 radiation 30.0 10 < th dose independent rect. 4 5
271 35.64 temperature 25.0 90 < th dose independent rect. 4 17
279 35.66 temperature 10.0 270 > th dose independent rect. 2 4
281 35.66 temperature 30.0 270 < th dose independent rect. 2 4
282 35.66 humidity 50.0 270 > th dose independent rect. 2 4
285 35.66 atmosphere 995.0 270 > th dose independent rect. 2 4
286 35.66 atmosphere 1015.0 270 < th dose independent rect. 2 4
291 35.66 temperature 25.0 270 < th dose independent rect. 2 18
292 35.66 temperature 10.0 270 > th dose independent rect. 6 20
326 35.71 precipitation 0.1 10 < th dose independent rect. 4 5
328 35.71 precipitation 0.1 10 < th dose dependent rect. 4 5
342 35.74 temperature 10.0 30 > th dose independent rect. 4 5
344 35.74 temperature 30.0 30 < th dose independent rect. 4 5
345 35.74 humidity 50.0 30 > th dose independent rect. 4 5
347 35.74 atmosphere 995.0 30 > th dose independent rect. 4 5
348 35.74 atmosphere 1015.0 30 < th dose independent rect. 4 5
350 35.74 temperature 10.0 30 > th dose independent rect. 9 19
415 35.83 temperature 30.0 90 < th dose dependent rect. 3 6
426 35.85 temperature 30.0 270 < th dose dependent rect. 3 2
442 35.93 radiation 20.0 10 < th dose independent rect. 4 16
481 35.96 temperature 30.0 270 < th dose dependent rect. 2 4
489 35.98 radiation 20.0 10 < th dose independent rect. 4 18
499 36.00 wind 1.0 270 > th dose independent rect. 15 15
508 36.01 wind 9.0 270 < th dose dependent rect. 7 19
518 36.03 temperature 10.0 270 > th dose dependent rect. 6 8
575 36.14 wind 1.0 270 > th dose independent rect. 2 16
589 36.16 precipitation 0.1 270 < th dose independent rect. 18 8
592 36.16 precipitation 0.1 270 < th dose dependent rect. 18 8
603 36.17 wind 9.0 10 < th dose dependent rect. 4 5
618 36.20 radiation 1.0 270 > th dose independent sin 2 NA
673 36.30 wind 9.0 270 < th dose dependent rect. 3 3
676 36.31 temperature 10.0 10 > th dose dependent rect. 9 8
707 36.36 radiation 40.0 270 < th dose dependent rect. 15 15
709 36.37 atmosphere 995.0 30 > th dose independent rect. 9 19
776 36.47 temperature 15.0 30 > th dose dependent rect. 9 6
778 36.47 temperature 10.0 270 > th dose dependent rect. 20 15
781 36.47 wind 9.0 90 < th dose dependent rect. 9 18
785 36.48 radiation 40.0 10 < th dose dependent rect. 4 5
793 36.49 wind 7.0 270 < th dose independent rect. 18 8
798 36.50 wind 9.0 270 < th dose dependent rect. 18 8
835 36.55 radiation 10.0 270 < th dose independent rect. 18 8
841 36.56 radiation 40.0 90 < th dose independent rect. 4 17
851 36.57 temperature 10.0 270 > th dose independent rect. 18 8
852 36.57 humidity 50.0 270 > th dose independent rect. 18 8
856 36.57 temperature 10.0 270 > th dose independent rect. 2 16
857 36.57 atmosphere 1015.0 270 < th dose independent rect. 2 16
859 36.57 temperature 10.0 270 > th dose dependent rect. 19 7
862 36.57 radiation 20.0 270 < th dose dependent rect. 18 8
867 36.58 temperature 30.0 270 < th dose independent rect. 19 7
870 36.58 atmosphere 995.0 270 > th dose independent rect. 19 7
880 36.58 radiation 1.0 270 < th dose dependent rect. 19 7
921 36.62 humidity 50.0 270 > th dose dependent rect. 2 4
943 36.64 temperature 30.0 90 < th dose dependent rect. 3 8
953 36.66 wind 7.0 270 < th dose independent rect. 6 9
963 36.67 temperature 10.0 1440 > th dose independent rect. 3 7
966 36.67 atmosphere 995.0 1440 > th dose independent rect. 3 7
968 36.67 temperature 10.0 1440 > th dose independent rect. 10 17
971 36.67 radiation 10.0 43200 < th dose dependent rect. 21 7
982 36.68 precipitation 0.1 270 < th dose independent rect. 2 16
989 36.68 precipitation 0.1 270 < th dose dependent rect. 2 16