Os03g0248200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os03g0248200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.05 | 0.453 | 11.2 | 1.04 | 0.808 | -0.781 | 0.242 | 1.82 | 0.125 | 12.5 | 89.57 | 37 | -- | -- |
| 98.63 | 0.463 | 11.2 | 1.14 | 0.76 | -0.666 | -0.533 | -- | 0.158 | 12.7 | 87.7 | 26 | -- | -- |
| 93.2 | 0.45 | 11.2 | 1.06 | 0.806 | -0.777 | -- | 1.65 | 0.127 | 12.6 | 89.5 | 40 | -- | -- |
| 99.75 | 0.465 | 11.2 | 1.12 | 0.765 | -0.661 | -- | -- | 0.155 | 12.5 | 87.84 | 27 | -- | -- |
| 111.83 | 0.495 | 11.2 | 1.03 | -- | -1.06 | -- | 1.03 | 0.138 | -- | 76.38 | 26 | -- | -- |
| 111.24 | 0.494 | 11.2 | 1.05 | 1.06 | -- | -0.358 | -- | 0.287 | 13.5 | -- | -- | -- | -- |
| 111.75 | 0.495 | 11.2 | 1.03 | 1.06 | -- | -- | -- | 0.285 | 13.4 | -- | -- | -- | -- |
| 115.03 | 0.502 | 11.2 | 1.04 | -- | -1.03 | -- | -- | 0.172 | -- | 71 | 3 | -- | -- |
| 132.09 | 0.535 | 11.2 | -- | 0.793 | -0.504 | -- | -- | 0.0573 | 12.7 | 85.67 | 23 | -- | -- |
| 181.28 | 0.629 | 11.2 | 0.992 | -- | -- | -- | -- | 0.262 | -- | -- | -- | -- | -- |
| 139.92 | 0.553 | 11.2 | -- | 1.05 | -- | -- | -- | 0.17 | 13.4 | -- | -- | -- | -- |
| 143.35 | 0.559 | 11.2 | -- | -- | -1.01 | -- | -- | 0.0637 | -- | 70 | 4 | -- | -- |
| 207.23 | 0.672 | 11.2 | -- | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.22 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 2 | 85.48 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 86.12 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 6 | 86.51 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 7 | 86.52 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 9 | 86.81 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 21 | 7 |
| 17 | 87.23 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 14 |
| 27 | 87.33 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 12 |
| 52 | 87.82 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 66 | 88.00 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 75 | 88.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 80 | 88.21 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 86 | 88.36 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 107 | 88.67 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 126 | 88.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 127 | 88.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 129 | 88.96 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 133 | 89.01 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 8 |
| 135 | 89.04 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 149 | 89.24 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 153 | 89.28 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 166 | 89.45 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 169 | 89.56 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 176 | 89.62 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 179 | 89.68 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 188 | 89.82 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 190 | 89.82 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 18 |
| 192 | 89.86 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 195 | 89.90 | humidity | 90.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 205 | 89.99 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 7 |
| 320 | 90.97 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 336 | 91.09 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 390 | 91.40 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 20 | 10 |
| 403 | 91.46 | humidity | 90.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 448 | 91.71 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 476 | 91.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 479 | 91.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 501 | 92.01 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 507 | 92.03 | humidity | 90.0 | 30 | > th | dose independent | sin | 7 | NA |
| 522 | 92.10 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 14 |
| 531 | 92.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 544 | 92.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 566 | 92.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 581 | 92.34 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 603 | 92.40 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 12 | NA |
| 610 | 92.43 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 19 | 14 |
| 621 | 92.49 | radiation | 1.0 | 90 | < th | dose independent | sin | 4 | NA |
| 639 | 92.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 650 | 92.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 19 |
| 674 | 92.91 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 678 | 92.93 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 14 |
| 688 | 92.95 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 15 |
| 690 | 92.96 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 8 |
| 696 | 92.98 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 21 | 17 |
| 705 | 93.02 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 21 | 15 |
| 741 | 93.10 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 742 | 93.10 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 757 | 93.15 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 762 | 93.17 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 779 | 93.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 10 |
| 799 | 93.34 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 11 | 22 |
| 800 | 93.34 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 824 | 93.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 838 | 93.45 | humidity | 90.0 | 30 | > th | dose dependent | no | NA | NA |
| 844 | 93.45 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 848 | 93.46 | radiation | 1.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 856 | 93.49 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 890 | 93.56 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 13 | NA |
| 915 | 93.61 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 957 | 93.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |