Os03g0247200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0247200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.72 | 0.46 | 7.31 | 1.49 | 0.768 | 1.55 | -0.504 | -0.702 | 0.651 | 6.24 | 29.5 | 30 | -- | -- |
| 96.46 | 0.457 | 7.32 | 1.39 | 0.762 | 1.53 | -0.522 | -- | 0.612 | 6.1 | 29.45 | 40 | -- | -- |
| 96.3 | 0.457 | 7.31 | 1.49 | 0.772 | 1.52 | -- | -0.794 | 0.648 | 6.11 | 29.46 | 30 | -- | -- |
| 97.23 | 0.459 | 7.32 | 1.37 | 0.759 | 1.52 | -- | -- | 0.617 | 6.09 | 29.23 | 40 | -- | -- |
| 113.48 | 0.496 | 7.29 | 1.66 | -- | 2.18 | -- | -1.24 | 0.758 | -- | 32.18 | 204 | -- | -- |
| 128.94 | 0.532 | 7.39 | 0.99 | 1.13 | -- | -0.158 | -- | 0.304 | 4.68 | -- | -- | -- | -- |
| 129.01 | 0.532 | 7.39 | 0.991 | 1.13 | -- | -- | -- | 0.305 | 4.67 | -- | -- | -- | -- |
| 114.74 | 0.499 | 7.32 | 1.52 | -- | 2.16 | -- | -- | 0.692 | -- | 31.52 | 205 | -- | -- |
| 141.32 | 0.557 | 7.38 | -- | 0.926 | 0.935 | -- | -- | 0.357 | 5.44 | 29.23 | 40 | -- | -- |
| 197.06 | 0.656 | 7.4 | 1.03 | -- | -- | -- | -- | 0.334 | -- | -- | -- | -- | -- |
| 154.88 | 0.582 | 7.42 | -- | 1.15 | -- | -- | -- | 0.194 | 4.65 | -- | -- | -- | -- |
| 171.32 | 0.61 | 7.38 | -- | -- | 1.76 | -- | -- | 0.433 | -- | 33.14 | 194 | -- | -- |
| 225.26 | 0.701 | 7.43 | -- | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.13 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 2 | 94.64 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 5 | 95.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 95.64 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 95.65 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 95.78 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 95.91 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 10 | 95.94 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 11 | 95.97 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 12 | 96.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 21 | 96.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 22 | 96.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 23 | 96.56 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 24 | 96.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 28 | 96.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 30 | 96.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 31 | 96.72 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 33 | 96.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 45 | 96.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 62 | 97.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 63 | 97.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 68 | 97.37 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 70 | 97.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 71 | 97.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 72 | 97.47 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 77 | 97.68 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 89 | 97.87 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 96 | 97.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 111 | 98.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 114 | 98.19 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 135 | 98.40 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 140 | 98.46 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 141 | 98.47 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 149 | 98.57 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 150 | 98.58 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 155 | 98.60 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 161 | 98.63 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 174 | 98.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 175 | 98.72 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 185 | 98.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 205 | 98.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 228 | 99.04 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 286 | 99.46 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 299 | 99.54 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 337 | 99.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 338 | 99.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 380 | 99.98 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 389 | 100.03 | temperature | 10.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 399 | 100.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 425 | 100.31 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 466 | 100.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 574 | 100.85 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 585 | 100.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 643 | 101.09 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 645 | 101.10 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 653 | 101.12 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 661 | 101.15 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 674 | 101.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 810 | 101.58 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 929 | 101.94 | temperature | 30.0 | 30 | < th | dose dependent | sin | 20 | NA |
| 997 | 102.17 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |