Os03g0247100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0247100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.31 | 0.227 | 9.21 | 1.05 | 0.779 | -0.384 | 0.0874 | 1.18 | -0.017 | 10.9 | 18 | 543 | -- | -- |
| 24.23 | 0.229 | 9.23 | 0.857 | 0.773 | -0.327 | -0.106 | -- | -0.06 | 10.4 | 17.7 | 1005 | -- | -- |
| 23.33 | 0.225 | 9.21 | 1.05 | 0.781 | -0.386 | -- | 1.16 | -0.0173 | 10.9 | 18 | 528 | -- | -- |
| 24.22 | 0.229 | 9.24 | 0.829 | 0.782 | -0.306 | -- | -- | -0.0814 | 10.4 | 17.9 | 1009 | -- | -- |
| 54.07 | 0.342 | 9.2 | 1.32 | -- | -0.786 | -- | 1.49 | 0.11 | -- | 18 | 801 | -- | -- |
| 26.13 | 0.24 | 9.25 | 0.731 | 0.841 | -- | -0.0565 | -- | -0.14 | 10.5 | -- | -- | -- | -- |
| 26.15 | 0.239 | 9.25 | 0.729 | 0.841 | -- | -- | -- | -0.14 | 10.5 | -- | -- | -- | -- |
| 54.4 | 0.344 | 9.24 | 0.96 | -- | -0.866 | -- | -- | 0.00724 | -- | 17.11 | 798 | -- | -- |
| 31.82 | 0.263 | 9.3 | -- | 0.846 | 0.445 | -- | -- | -0.37 | 10.5 | 16.93 | 47520 | -- | -- |
| 69.51 | 0.39 | 9.27 | 0.714 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 40.15 | 0.296 | 9.27 | -- | 0.837 | -- | -- | -- | -0.221 | 10.4 | -- | -- | -- | -- |
| 75.42 | 0.404 | 9.27 | -- | -- | -0.504 | -- | -- | -0.15 | -- | 21.8 | 787 | -- | -- |
| 82.98 | 0.425 | 9.29 | -- | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.06 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 3 | 22.12 | wind | 1.0 | 720 | > th | dose independent | rect. | 10 | 15 |
| 20 | 22.34 | temperature | 30.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 74 | 22.65 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 75 | 22.65 | wind | 1.0 | 720 | > th | dose independent | rect. | 18 | 7 |
| 86 | 22.70 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 93 | 22.74 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 101 | 22.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 21 |
| 116 | 22.82 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 7 |
| 121 | 22.85 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 125 | 22.85 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 133 | 22.87 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 144 | 22.89 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 146 | 22.90 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 12 |
| 155 | 22.93 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 161 | 22.94 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 2 |
| 193 | 22.99 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 259 | 23.09 | temperature | 20.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 268 | 23.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 271 | 23.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 309 | 23.15 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 318 | 23.16 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 324 | 23.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 331 | 23.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 367 | 23.21 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 380 | 23.22 | temperature | 20.0 | 720 | < th | dose independent | sin | 12 | NA |
| 405 | 23.24 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 444 | 23.27 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 452 | 23.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 460 | 23.28 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 475 | 23.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 481 | 23.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 510 | 23.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 528 | 23.33 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 543 | 23.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 23 |
| 575 | 23.36 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 22 |
| 590 | 23.37 | wind | 1.0 | 720 | > th | dose independent | sin | 18 | NA |
| 596 | 23.37 | wind | 1.0 | 720 | > th | dose dependent | rect. | 10 | 4 |
| 645 | 23.40 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 679 | 23.41 | radiation | 10.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 706 | 23.42 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 707 | 23.42 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 11 |
| 708 | 23.42 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 4 | 15 |
| 742 | 23.43 | radiation | 10.0 | 4320 | < th | dose independent | no | NA | NA |
| 746 | 23.43 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 795 | 23.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 800 | 23.44 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 807 | 23.44 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 818 | 23.44 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 832 | 23.45 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 836 | 23.45 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 852 | 23.45 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 869 | 23.46 | radiation | 10.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 888 | 23.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 894 | 23.46 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 925 | 23.47 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 943 | 23.48 | wind | 9.0 | 720 | < th | dose independent | rect. | 6 | 7 |