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Os03g0245700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Very-long-chain 3-ketoacyl-CoA synthase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0264) R2 : 0.122
β1 : -0.724 (0.0966) R2dD : 0.112 R2D : 0.118
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0684 (0.0563) R2dN8 : 0.0038 R2N8 : 0.00986
σ : 0.495
deviance : 112.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.24 0.444 10.8 -0.792 1.03 -1.02 0.809 0.211 -0.011 1.56 5.965e-05 110 -- --
89.3 0.44 10.8 -0.795 1.04 -1.03 1.04 -- -0.0202 1.57 2.028e-05 112 -- --
89.66 0.441 10.8 -0.811 1.03 -1.02 -- 0.822 -0.00871 1.52 0.03 110 -- --
93.65 0.451 10.8 -0.814 1.03 -1.02 -- -- -0.0115 1.61 0.03 112 -- --
99.34 0.464 10.8 -0.767 -- -0.296 -- 0.803 0.0513 -- 0.05237 53 -- --
104.4 0.479 10.7 -0.684 0.269 -- -0.9 -- 0.0711 10.2 -- -- -- --
107.42 0.485 10.7 -0.722 0.286 -- -- -- 0.0672 9.34 -- -- -- --
103.26 0.473 10.8 -0.757 -- -0.301 -- -- 0.0604 -- 2.452e-05 50 -- --
110.96 0.491 10.7 -- 0.952 -0.916 -- -- 0.0727 1.7 0.02923 110 -- --
112.2 0.495 10.7 -0.724 -- -- -- -- 0.0684 -- -- -- -- --
121.16 0.515 10.7 -- 0.287 -- -- -- 0.148 9.53 -- -- -- --
117.99 0.506 10.7 -- -- -0.26 -- -- 0.126 -- 0.04997 50 -- --
126.01 0.524 10.7 -- -- -- -- -- 0.149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 76.77 radiation 1.0 90 < th dose dependent sin 11 NA
3 78.22 radiation 1.0 90 < th dose independent sin 11 NA
4 78.53 radiation 1.0 90 > th dose independent sin 11 NA
9 80.15 radiation 1.0 90 > th dose independent rect. 18 15
10 80.30 humidity 50.0 270 > th dose dependent rect. 18 9
17 80.85 radiation 10.0 270 < th dose independent rect. 4 3
18 80.93 atmosphere 995.0 270 > th dose dependent rect. 4 2
22 80.97 wind 9.0 270 < th dose independent rect. 6 22
28 81.42 wind 9.0 90 < th dose independent rect. 9 20
30 81.47 radiation 1.0 90 > th dose independent rect. 4 5
61 81.76 radiation 20.0 270 < th dose dependent rect. 4 3
88 82.00 atmosphere 995.0 90 > th dose dependent rect. 4 5
94 82.11 atmosphere 995.0 270 > th dose independent rect. 15 16
96 82.22 radiation 30.0 270 < th dose independent rect. 14 17
98 82.27 radiation 30.0 90 < th dose independent rect. 5 4
101 82.29 precipitation 0.1 270 < th dose independent rect. 4 2
102 82.29 precipitation 0.1 270 < th dose dependent rect. 4 2
104 82.31 precipitation 0.1 270 < th dose independent rect. 3 4
106 82.31 temperature 10.0 270 > th dose dependent rect. 4 2
107 82.31 atmosphere 1000.0 10 > th dose dependent rect. 5 4
108 82.31 precipitation 0.1 270 < th dose dependent rect. 3 4
110 82.33 precipitation 0.1 270 < th dose independent rect. 15 16
111 82.33 precipitation 0.1 270 < th dose dependent rect. 15 16
112 82.34 temperature 30.0 90 < th dose independent rect. 5 4
119 82.45 wind 7.0 270 < th dose independent rect. 4 2
120 82.45 wind 7.0 270 < th dose independent rect. 7 8
123 82.47 precipitation 0.1 90 < th dose independent rect. 5 4
125 82.47 precipitation 0.1 90 < th dose dependent rect. 5 4
126 82.48 humidity 60.0 90 > th dose independent rect. 5 4
130 82.51 temperature 10.0 270 > th dose independent rect. 4 2
132 82.51 temperature 30.0 270 < th dose independent rect. 4 2
133 82.51 humidity 50.0 270 > th dose independent rect. 4 2
136 82.51 atmosphere 995.0 270 > th dose independent rect. 4 2
137 82.51 atmosphere 1015.0 270 < th dose independent rect. 4 2
141 82.51 temperature 10.0 270 > th dose independent rect. 6 22
144 82.55 wind 9.0 90 < th dose independent rect. 5 4
145 82.55 temperature 10.0 90 > th dose independent rect. 5 4
148 82.55 atmosphere 995.0 90 > th dose independent rect. 5 4
149 82.55 atmosphere 1015.0 90 < th dose independent rect. 5 4
150 82.55 temperature 10.0 90 > th dose independent rect. 9 20
155 82.65 radiation 1.0 270 > th dose independent rect. 7 8
156 82.65 humidity 50.0 270 > th dose independent rect. 7 21
157 82.65 wind 9.0 90 < th dose dependent rect. 5 4
162 82.74 precipitation 0.1 270 < th dose independent rect. 7 8
163 82.74 precipitation 0.1 270 < th dose dependent rect. 7 8
178 82.79 wind 7.0 270 < th dose independent rect. 3 4
179 82.80 humidity 50.0 270 > th dose independent rect. 7 8
182 82.81 humidity 60.0 10 > th dose dependent rect. 20 9
188 82.84 temperature 10.0 270 > th dose independent rect. 3 4
191 82.84 humidity 50.0 270 > th dose independent rect. 3 4
193 82.84 atmosphere 995.0 270 > th dose independent rect. 3 4
194 82.84 atmosphere 1015.0 270 < th dose independent rect. 3 4
201 82.84 temperature 10.0 270 > th dose independent rect. 7 20
208 82.87 temperature 10.0 270 > th dose independent rect. 7 8
209 82.87 atmosphere 1015.0 270 < th dose independent rect. 7 8
210 82.87 temperature 10.0 270 > th dose independent rect. 15 16
212 82.88 humidity 50.0 90 > th dose dependent rect. 5 4
238 82.97 precipitation 0.1 270 < th dose independent rect. 7 20
241 82.97 precipitation 0.1 270 < th dose dependent rect. 7 20
244 83.00 temperature 10.0 270 > th dose dependent rect. 7 7
255 83.10 radiation 20.0 270 < th dose dependent rect. 3 15
258 83.12 wind 9.0 10 < th dose independent rect. 9 20
259 83.12 radiation 40.0 270 < th dose dependent rect. 14 17
272 83.17 precipitation 0.1 90 < th dose independent rect. 9 20
275 83.17 precipitation 0.1 90 < th dose dependent rect. 9 20
291 83.24 temperature 10.0 10 > th dose dependent rect. 5 4
297 83.36 wind 1.0 270 > th dose independent rect. 3 4
299 83.36 temperature 10.0 90 > th dose dependent rect. 4 5
302 83.37 radiation 1.0 30 < th dose dependent rect. 20 10
307 83.41 radiation 10.0 270 < th dose independent rect. 3 15
331 83.51 atmosphere 995.0 270 > th dose independent rect. 7 8
337 83.55 precipitation 0.1 270 < th dose independent rect. 6 22
340 83.55 precipitation 0.1 270 < th dose dependent rect. 6 22
357 83.58 radiation 1.0 10 < th dose independent rect. 20 10
367 83.67 wind 9.0 10 < th dose dependent rect. 10 19
371 83.69 atmosphere 1005.0 270 > th dose independent rect. 4 2
375 83.73 temperature 30.0 10 < th dose independent rect. 5 5
377 83.73 radiation 20.0 270 < th dose dependent rect. 3 6
381 83.74 wind 9.0 270 < th dose dependent rect. 4 2
383 83.74 temperature 10.0 90 > th dose dependent rect. 9 6
384 83.74 wind 9.0 90 < th dose dependent rect. 9 19
394 83.75 precipitation 0.1 10 < th dose independent rect. 5 4
397 83.75 precipitation 0.1 10 < th dose dependent rect. 5 4
402 83.78 wind 1.0 270 > th dose independent rect. 7 8
403 83.78 wind 7.0 270 < th dose independent rect. 19 8
419 83.83 atmosphere 1005.0 90 > th dose independent rect. 5 4
422 83.83 wind 9.0 270 < th dose independent rect. 15 16
423 83.84 wind 7.0 10 < th dose independent rect. 5 4
425 83.84 temperature 10.0 10 > th dose independent rect. 5 4
428 83.84 humidity 50.0 10 > th dose independent rect. 5 4
430 83.84 atmosphere 995.0 10 > th dose independent rect. 5 4
431 83.84 atmosphere 1015.0 10 < th dose independent rect. 5 4
432 83.84 temperature 10.0 10 > th dose independent rect. 9 20
438 83.87 precipitation 0.1 270 < th dose independent rect. 3 16
439 83.87 precipitation 0.1 270 < th dose dependent rect. 3 16
440 83.87 wind 9.0 270 < th dose dependent rect. 7 20
445 83.89 atmosphere 1005.0 10 > th dose independent rect. 5 4
460 84.00 wind 9.0 10 < th dose dependent rect. 5 4
465 84.02 atmosphere 995.0 270 > th dose independent rect. 3 16
513 84.20 radiation 40.0 10 < th dose independent rect. 5 4
543 84.26 radiation 1.0 270 < th dose dependent rect. 18 9
571 84.40 wind 1.0 270 > th dose independent rect. 14 17
584 84.42 radiation 1.0 270 < th dose independent rect. 18 9
587 84.45 humidity 60.0 270 > th dose independent rect. 19 8
596 84.48 temperature 10.0 270 > th dose independent rect. 19 8
597 84.48 temperature 30.0 270 < th dose independent rect. 19 8
599 84.48 atmosphere 995.0 270 > th dose independent rect. 19 8
605 84.48 temperature 10.0 270 > th dose independent rect. 3 16
606 84.48 atmosphere 1015.0 270 < th dose independent rect. 3 16
620 84.50 precipitation 0.1 10 < th dose independent rect. 9 20
621 84.50 precipitation 0.1 10 < th dose dependent rect. 9 20
632 84.56 wind 1.0 90 > th dose independent rect. 5 4
651 84.63 atmosphere 995.0 90 > th dose independent rect. 9 20
665 84.69 precipitation 0.1 270 < th dose independent rect. 19 8
666 84.69 precipitation 0.1 270 < th dose dependent rect. 19 8
669 84.71 wind 1.0 270 > th dose independent rect. 5 1
750 84.95 wind 7.0 10 < th dose independent rect. 20 9
783 85.12 wind 9.0 10 < th dose dependent rect. 20 9
794 85.16 humidity 90.0 90 < th dose independent rect. 9 6
798 85.17 atmosphere 995.0 90 > th dose independent rect. 5 14
815 85.20 atmosphere 995.0 10 > th dose independent rect. 5 15
846 85.30 wind 9.0 270 < th dose dependent rect. 18 9
866 85.33 temperature 10.0 90 > th dose independent rect. 5 14
867 85.33 atmosphere 1015.0 90 < th dose independent rect. 5 14
888 85.36 radiation 40.0 10 < th dose dependent rect. 5 5
901 85.37 humidity 50.0 90 > th dose independent rect. 9 20
920 85.39 radiation 1.0 90 > th dose dependent rect. 18 13
927 85.41 temperature 10.0 10 > th dose independent rect. 20 9
928 85.41 temperature 30.0 10 < th dose independent rect. 20 9
929 85.41 humidity 50.0 10 > th dose independent rect. 20 9
932 85.41 atmosphere 995.0 10 > th dose independent rect. 20 9
938 85.41 temperature 10.0 10 > th dose independent rect. 5 15
940 85.41 atmosphere 1015.0 10 < th dose independent rect. 5 15
985 85.50 atmosphere 995.0 10 > th dose independent rect. 9 20
990 85.52 precipitation 0.1 10 < th dose independent rect. 5 15
993 85.52 precipitation 0.1 10 < th dose dependent rect. 5 15