Os03g0245500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os03g0245500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 413.87 | 0.956 | 7.33 | 0.157 | 1.09 | -0.582 | -2.36 | -13.2 | -1.33 | 13.4 | 24.73 | 734 | 17.7 | 0.95 |
| 464.69 | 1 | 7.03 | 2.36 | 0.604 | -1.89 | -1.55 | -- | -0.78 | 13 | 21.7 | 791 | 17.8 | 0.433 |
| 434.18 | 0.97 | 7.32 | 0.313 | 1.12 | -0.63 | -- | -11.8 | -1.32 | 13.1 | 24.95 | 734 | 17.7 | 0.866 |
| 469.32 | 1.01 | 7.04 | 2.38 | 0.608 | -1.81 | -- | -- | -0.745 | 13.5 | 21.37 | 789 | 17.8 | 0.425 |
| 483.47 | 1.02 | 7.24 | 0.586 | -- | -1.75 | -- | -8.22 | -1.19 | -- | 23.46 | 793 | 17.8 | 0.667 |
| 589.09 | 1.14 | 7.09 | 2.03 | 1.6 | -- | -0.824 | -- | -0.941 | 13.5 | -- | -- | -- | -- |
| 591.78 | 1.14 | 7.09 | 2 | 1.6 | -- | -- | -- | -0.946 | 13.4 | -- | -- | -- | -- |
| 477.44 | 1.02 | 7.05 | 2.36 | -- | -2.04 | -- | -- | -0.742 | -- | 19.17 | 813 | 17.1 | 1.32 |
| 614.44 | 1.15 | 7.01 | -- | 0.699 | -1.65 | -- | -- | -0.843 | 13.2 | 21.51 | 818 | 17.8 | 0.616 |
| 748.52 | 1.28 | 7.11 | 1.94 | -- | -- | -- | -- | -0.98 | -- | -- | -- | -- | -- |
| 697.11 | 1.24 | 7.14 | -- | 1.56 | -- | -- | -- | -1.17 | 13.4 | -- | -- | -- | -- |
| 620.05 | 1.16 | 7.12 | -- | -- | -2.02 | -- | -- | -1.06 | -- | 20.01 | 791 | 17.6 | 0.75 |
| 847.36 | 1.36 | 7.16 | -- | -- | -- | -- | -- | -1.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.54 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 427.83 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 9 | 438.92 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 2 |
| 19 | 444.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 37 | 450.89 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 43 | 453.51 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 45 | 454.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 49 | 454.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 10 |
| 51 | 454.68 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 74 | 456.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 78 | 456.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 83 | 457.27 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 97 | 458.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 106 | 459.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 135 | 461.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 150 | 462.13 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 9 |
| 210 | 464.31 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 5 |
| 250 | 466.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 252 | 466.73 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 2 |
| 259 | 467.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 294 | 468.57 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 326 | 469.00 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 329 | 469.06 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 395 | 469.87 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 429 | 470.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 430 | 470.42 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 16 |
| 441 | 470.51 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 493 | 471.35 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 506 | 471.53 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 507 | 471.54 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 520 | 471.69 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 576 | 472.37 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 597 | 472.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 631 | 472.85 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 643 | 472.95 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 646 | 472.96 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 665 | 473.05 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 756 | 474.00 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 828 | 474.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 863 | 474.78 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 883 | 474.97 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 884 | 474.98 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 894 | 475.08 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 895 | 475.08 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 928 | 475.38 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 938 | 475.45 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 942 | 475.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 3 |