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Os03g0243200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0181) R2 : 0.481
β1 : -1.34 (0.0662) R2dD : 0.484 R2D : 0.398
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.284 (0.0386) R2dN8 : 0.0825 R2N8 : -0.00302
σ : 0.339
deviance : 52.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.7 0.296 9.9 -1.28 0.521 0.502 0.17 -0.19 -0.267 14.3 0.06033 26 -- --
39.8 0.294 9.89 -1.27 0.52 0.502 0.353 -- -0.266 14.3 0.05999 26 -- --
39.76 0.294 9.9 -1.26 0.524 0.507 -- -0.269 -0.268 14.3 0.0526 25 -- --
40.28 0.296 9.9 -1.27 0.526 0.507 -- -- -0.267 14.3 0.06 25 -- --
46.82 0.32 9.9 -1.32 -- 0.223 -- -0.275 -0.267 -- 0.1315 27 -- --
45.25 0.315 9.91 -1.34 0.364 -- -0.308 -- -0.278 19.8 -- -- -- --
45.51 0.316 9.91 -1.33 0.366 -- -- -- -0.279 19.7 -- -- -- --
47.21 0.321 9.9 -1.33 -- 0.221 -- -- -0.269 -- 0.04943 10 -- --
83.92 0.427 9.86 -- 0.544 0.503 -- -- -0.215 14.3 0.009178 27 -- --
52.73 0.339 9.9 -1.34 -- -- -- -- -0.284 -- -- -- -- --
92.48 0.45 9.88 -- 0.377 -- -- -- -0.13 19.5 -- -- -- --
93.53 0.45 9.86 -- -- 0.246 -- -- -0.124 -- 0.01815 15 -- --
100.07 0.467 9.87 -- -- -- -- -- -0.135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.20 humidity 50.0 270 > th dose independent rect. 16 10
2 36.46 humidity 90.0 270 < th dose independent rect. 9 1
3 36.53 wind 5.0 270 < th dose independent rect. 7 4
4 36.62 radiation 30.0 270 < th dose dependent rect. 16 10
5 36.63 humidity 90.0 270 < th dose independent rect. 7 4
10 36.75 wind 9.0 270 < th dose dependent rect. 7 4
12 36.81 radiation 20.0 270 < th dose independent rect. 16 10
18 36.87 temperature 10.0 270 > th dose dependent rect. 9 1
20 36.89 humidity 90.0 10 < th dose independent rect. 9 6
21 36.89 temperature 10.0 270 > th dose dependent rect. 7 4
22 36.90 wind 7.0 270 < th dose independent rect. 6 7
33 37.00 temperature 10.0 10 > th dose dependent rect. 9 5
35 37.05 radiation 1.0 270 > th dose independent rect. 7 4
37 37.05 temperature 10.0 90 > th dose dependent rect. 8 6
39 37.07 wind 9.0 270 < th dose dependent rect. 7 6
43 37.10 temperature 30.0 270 < th dose independent rect. 17 9
47 37.14 temperature 15.0 270 > th dose independent rect. 7 4
49 37.15 wind 7.0 270 < th dose independent rect. 9 1
55 37.16 radiation 40.0 90 < th dose independent rect. 13 18
63 37.22 radiation 1.0 90 > th dose independent rect. 14 17
67 37.25 temperature 15.0 90 > th dose independent rect. 8 6
75 37.27 wind 9.0 270 < th dose independent rect. 17 9
78 37.28 precipitation 0.1 270 < th dose independent rect. 2 15
79 37.28 precipitation 0.1 270 < th dose dependent rect. 2 15
80 37.29 humidity 50.0 270 > th dose independent rect. 6 20
82 37.31 temperature 15.0 270 > th dose independent rect. 9 1
89 37.33 precipitation 0.1 270 < th dose independent rect. 7 4
93 37.33 precipitation 0.1 270 < th dose dependent rect. 7 4
95 37.34 radiation 1.0 270 > th dose independent rect. 9 1
101 37.36 precipitation 0.1 270 < th dose independent rect. 11 20
102 37.36 precipitation 0.1 270 < th dose dependent rect. 11 20
104 37.37 temperature 10.0 270 > th dose independent rect. 17 9
108 37.37 temperature 10.0 270 > th dose independent rect. 2 15
109 37.37 atmosphere 1015.0 270 < th dose independent rect. 2 15
110 37.37 precipitation 0.1 30 < th dose independent rect. 15 18
111 37.37 precipitation 0.1 30 < th dose dependent rect. 15 18
113 37.38 atmosphere 995.0 270 > th dose independent rect. 7 4
114 37.38 atmosphere 1015.0 270 < th dose independent rect. 7 4
115 37.38 temperature 10.0 270 > th dose independent rect. 11 20
124 37.41 precipitation 0.1 90 < th dose independent rect. 8 6
126 37.41 precipitation 0.1 90 < th dose dependent rect. 8 6
131 37.43 wind 1.0 10 > th dose independent rect. 9 6
135 37.43 temperature 10.0 270 > th dose dependent rect. 3 3
140 37.44 radiation 40.0 10 < th dose independent rect. 15 18
141 37.44 radiation 1.0 90 < th dose dependent sin 13 NA
142 37.45 humidity 50.0 270 > th dose independent rect. 7 4
150 37.47 wind 7.0 270 < th dose independent rect. 6 21
158 37.49 temperature 10.0 10 > th dose independent rect. 9 6
160 37.49 atmosphere 995.0 10 > th dose independent rect. 9 6
161 37.49 atmosphere 1015.0 10 < th dose independent rect. 9 6
162 37.49 precipitation 0.1 10 < th dose independent rect. 9 6
163 37.49 temperature 10.0 10 > th dose independent rect. 15 18
165 37.49 precipitation 0.1 10 < th dose dependent rect. 9 6
166 37.50 radiation 1.0 270 < th dose independent rect. 11 15
178 37.53 precipitation 0.1 270 < th dose independent rect. 9 1
180 37.53 atmosphere 995.0 90 > th dose independent rect. 8 6
181 37.53 atmosphere 1015.0 90 < th dose independent rect. 8 6
182 37.53 temperature 10.0 90 > th dose independent rect. 14 18
184 37.53 precipitation 0.1 270 < th dose dependent rect. 9 1
188 37.55 precipitation 0.1 270 < th dose independent rect. 17 9
193 37.55 precipitation 0.1 270 < th dose dependent rect. 17 9
209 37.58 atmosphere 995.0 270 > th dose independent rect. 9 1
210 37.58 atmosphere 1015.0 270 < th dose independent rect. 9 1
219 37.58 temperature 10.0 270 > th dose independent rect. 10 23
222 37.59 wind 1.0 270 > th dose independent rect. 9 1
225 37.59 wind 9.0 270 < th dose dependent rect. 9 1
235 37.61 radiation 1.0 270 > th dose independent rect. 6 7
253 37.64 humidity 50.0 270 > th dose independent rect. 9 1
264 37.64 radiation 40.0 10 < th dose independent rect. 12 21
276 37.66 temperature 10.0 1440 > th dose independent rect. 10 6
280 37.66 temperature 10.0 1440 > th dose independent rect. 16 18
304 37.69 wind 7.0 30 < th dose independent rect. 9 19
312 37.70 radiation 1.0 10 > th dose independent rect. 9 6
314 37.70 wind 9.0 10 < th dose independent rect. 15 18
320 37.71 atmosphere 995.0 270 > th dose independent rect. 11 20
321 37.71 radiation 1.0 270 > th dose independent rect. 10 21
338 37.76 radiation 1.0 90 < th dose independent sin 13 NA
360 37.79 wind 9.0 270 < th dose independent rect. 11 20
389 37.83 temperature 10.0 270 > th dose dependent rect. 2 5
406 37.86 radiation 1.0 270 > th dose independent rect. 11 19
415 37.88 humidity 80.0 270 > th dose independent rect. 3 3
418 37.88 atmosphere 995.0 270 > th dose independent rect. 2 15
420 37.88 atmosphere 995.0 270 > th dose independent rect. 13 17
430 37.89 radiation 10.0 270 < th dose independent rect. 3 3
444 37.90 radiation 10.0 270 < th dose independent rect. 2 5
470 37.95 precipitation 0.1 270 < th dose independent rect. 3 3
476 37.95 precipitation 0.1 270 < th dose dependent rect. 3 3
484 37.96 radiation 10.0 270 < th dose dependent rect. 3 3
489 37.98 wind 9.0 270 < th dose independent rect. 2 15
493 38.00 wind 1.0 270 > th dose independent rect. 7 4
496 38.01 atmosphere 1010.0 270 < th dose independent rect. 3 3
503 38.01 wind 1.0 270 > th dose independent rect. 11 20
513 38.03 humidity 50.0 270 > th dose independent rect. 6 7
519 38.04 atmosphere 995.0 270 > th dose independent rect. 17 9
528 38.05 atmosphere 1015.0 270 < th dose independent rect. 17 9
561 38.09 wind 1.0 270 > th dose independent rect. 12 18
563 38.09 humidity 50.0 270 > th dose dependent rect. 3 3
582 38.11 atmosphere 995.0 10 > th dose independent rect. 15 18
588 38.12 wind 7.0 270 < th dose independent rect. 3 3
590 38.12 temperature 10.0 270 > th dose independent rect. 3 3
592 38.12 temperature 30.0 270 < th dose independent rect. 3 3
593 38.12 humidity 50.0 270 > th dose independent rect. 3 3
596 38.12 atmosphere 995.0 270 > th dose independent rect. 3 3
605 38.12 temperature 10.0 270 > th dose independent rect. 6 21
647 38.18 radiation 1.0 90 > th dose independent sin 13 NA
665 38.19 humidity 80.0 90 < th dose independent rect. 20 18
696 38.22 atmosphere 1015.0 270 < th dose independent rect. 6 20
730 38.26 wind 9.0 270 < th dose dependent rect. 6 20
750 38.29 wind 9.0 270 < th dose dependent rect. 3 3
790 38.32 humidity 90.0 270 < th dose independent rect. 1 11
810 38.34 atmosphere 1015.0 30 < th dose independent rect. 9 19
812 38.34 precipitation 0.1 270 < th dose independent rect. 6 21
815 38.34 precipitation 0.1 270 < th dose dependent rect. 6 21
871 38.40 radiation 40.0 30 < th dose independent rect. 4 5
873 38.40 atmosphere 995.0 30 > th dose independent rect. 9 19
894 38.42 precipitation 0.1 30 < th dose independent rect. 4 5
900 38.42 precipitation 0.1 30 < th dose dependent rect. 4 5
902 38.43 wind 7.0 30 < th dose independent rect. 4 5
904 38.43 temperature 10.0 30 > th dose independent rect. 4 5
907 38.43 temperature 30.0 30 < th dose independent rect. 4 5
908 38.43 humidity 50.0 30 > th dose independent rect. 4 5
910 38.43 atmosphere 995.0 30 > th dose independent rect. 4 5
912 38.43 atmosphere 1015.0 30 < th dose independent rect. 4 5
914 38.43 humidity 50.0 270 > th dose independent rect. 7 16
917 38.43 temperature 10.0 30 > th dose independent rect. 9 19
938 38.45 radiation 1.0 270 < th dose dependent rect. 6 20