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Os03g0241800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Tetratricopeptide-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.46 (0.0275) R2 : 0.035
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.235 (0.0578) R2dN8 : 0.0452 R2N8 : 0.035
σ : 0.517
deviance : 122.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
101.51 0.473 6.41 -0.281 0.46 -0.813 -1.1 -2.13 -0.248 8.78 5.299 4238 -- --
103.95 0.475 6.43 -0.243 0.419 -0.478 -1.14 -- -0.255 8.58 4.903 4305 -- --
105.15 0.478 6.41 -0.311 0.46 -0.786 -- -2.04 -0.24 9.47 5.355 4284 -- --
107.42 0.483 6.46 -0.26 0.451 -0.476 -- -- -0.275 9.56 5.238 4335 -- --
116.32 0.502 6.41 -0.391 -- -0.74 -- -1.32 -0.157 -- 4.635 5132 -- --
107.94 0.487 6.45 -0.0878 0.424 -- -1.09 -- -0.252 8.78 -- -- -- --
111.63 0.495 6.45 -0.121 0.426 -- -- -- -0.25 9.45 -- -- -- --
117.23 0.504 6.45 -0.352 -- -0.579 -- -- -0.197 -- 4.118 5117 -- --
109.31 0.487 6.45 -- 0.448 -0.369 -- -- -0.255 9.49 4.836 4293 -- --
122.3 0.517 6.46 -0.124 -- -- -- -- -0.249 -- -- -- -- --
112.01 0.495 6.45 -- 0.427 -- -- -- -0.237 9.47 -- -- -- --
119.72 0.51 6.44 -- -- -0.408 -- -- -0.19 -- 4.1 5073 -- --
122.71 0.517 6.46 -- -- -- -- -- -0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.15 wind 3.0 90 > th dose dependent rect. 2 1
2 90.25 wind 5.0 90 > th dose independent rect. 2 2
7 90.44 wind 3.0 10 > th dose dependent rect. 3 1
9 90.50 wind 3.0 10 > th dose independent rect. 3 1
30 92.28 precipitation 0.1 30 > th dose dependent rect. 3 2
32 92.29 precipitation 0.1 30 > th dose independent rect. 3 1
61 94.08 wind 7.0 10 > th dose independent rect. 21 8
66 94.08 wind 7.0 10 > th dose dependent rect. 21 8
166 96.55 temperature 20.0 10 > th dose independent rect. 3 2
167 96.57 temperature 20.0 90 > th dose independent rect. 3 1
169 96.61 temperature 20.0 90 > th dose dependent rect. 3 1
248 97.23 precipitation 0.1 30 > th dose independent sin 4 NA
249 97.23 precipitation 0.1 30 > th dose dependent sin 4 NA
258 97.49 precipitation 0.1 30 < th dose independent sin 4 NA
259 97.49 precipitation 0.1 30 < th dose dependent sin 4 NA
355 98.57 radiation 40.0 270 < th dose independent rect. 12 12
368 98.67 radiation 40.0 270 < th dose dependent rect. 12 12
371 98.71 atmosphere 1010.0 90 < th dose dependent rect. 1 4
383 98.86 humidity 70.0 720 > th dose independent rect. 19 5
389 98.93 humidity 90.0 90 < th dose independent rect. 21 11
390 98.94 radiation 40.0 10 < th dose dependent rect. 6 21
391 98.96 humidity 90.0 30 > th dose independent rect. 3 2
406 99.15 atmosphere 1015.0 270 < th dose dependent rect. 1 1
431 99.26 atmosphere 1000.0 90 > th dose independent rect. 5 22
434 99.30 temperature 30.0 720 < th dose independent rect. 13 1
506 99.40 temperature 25.0 90 < th dose independent rect. 1 4
511 99.41 atmosphere 1015.0 90 < th dose dependent rect. 3 2
518 99.44 temperature 25.0 270 < th dose independent rect. 1 1
521 99.45 temperature 25.0 270 < th dose independent rect. 23 12
525 99.46 atmosphere 1000.0 90 > th dose independent rect. 5 10
526 99.46 humidity 80.0 90 > th dose dependent rect. 3 2
537 99.53 wind 1.0 270 > th dose independent rect. 19 13
538 99.53 humidity 70.0 720 > th dose independent rect. 19 14
541 99.54 wind 5.0 4320 > th dose dependent rect. 8 2
554 99.61 radiation 40.0 720 < th dose independent rect. 19 15
557 99.63 wind 9.0 720 < th dose dependent rect. 7 5
579 99.71 humidity 90.0 90 > th dose independent rect. 24 5
580 99.71 radiation 10.0 30 < th dose independent rect. 6 21
585 99.73 wind 7.0 90 < th dose independent rect. 15 14
594 99.78 temperature 30.0 720 < th dose independent rect. 19 14
596 99.80 humidity 70.0 90 > th dose dependent rect. 24 5
613 99.93 atmosphere 1015.0 10 < th dose dependent rect. 1 5
621 99.96 humidity 80.0 270 > th dose independent rect. 1 1
624 99.96 radiation 40.0 720 < th dose dependent rect. 21 10
626 99.97 wind 7.0 720 < th dose independent rect. 7 5
627 99.97 temperature 20.0 720 > th dose independent rect. 9 10
629 99.98 temperature 20.0 270 > th dose independent rect. 1 1
633 99.99 wind 7.0 720 < th dose independent rect. 19 5
636 100.00 atmosphere 1000.0 270 > th dose independent rect. 2 23
652 100.09 radiation 1.0 90 < th dose dependent rect. 3 2
654 100.10 wind 5.0 720 < th dose independent rect. 9 2
661 100.11 wind 9.0 270 < th dose independent rect. 8 11
666 100.13 radiation 1.0 90 < th dose independent rect. 3 2
673 100.14 atmosphere 1000.0 90 > th dose independent rect. 5 20
678 100.15 precipitation 0.1 90 < th dose independent rect. 5 22
680 100.15 precipitation 0.1 90 < th dose dependent rect. 5 22
684 100.18 wind 9.0 90 < th dose independent rect. 3 2
685 100.18 temperature 10.0 90 > th dose independent rect. 3 2
687 100.18 temperature 30.0 90 < th dose independent rect. 3 2
688 100.18 humidity 50.0 90 > th dose independent rect. 3 2
691 100.18 atmosphere 995.0 90 > th dose independent rect. 3 2
692 100.18 atmosphere 1010.0 90 < th dose independent rect. 3 2
697 100.18 temperature 10.0 90 > th dose independent rect. 5 22
719 100.25 wind 9.0 720 < th dose independent rect. 19 14
724 100.27 atmosphere 1000.0 10 > th dose independent rect. 6 10
729 100.30 humidity 60.0 270 > th dose dependent rect. 1 1
734 100.30 temperature 10.0 10 > th dose dependent rect. 16 14
735 100.31 wind 1.0 90 > th dose independent rect. 5 22
736 100.31 temperature 30.0 90 < th dose independent rect. 5 22
758 100.35 radiation 40.0 30 < th dose dependent rect. 12 15
764 100.37 wind 9.0 720 < th dose independent rect. 21 10
788 100.43 radiation 10.0 10 < th dose independent rect. 16 14
790 100.44 precipitation 0.1 90 < th dose independent rect. 3 2
791 100.44 temperature 20.0 10 > th dose independent rect. 3 19
792 100.44 temperature 10.0 270 > th dose dependent rect. 1 1
794 100.44 precipitation 0.1 90 < th dose dependent rect. 3 2
798 100.46 atmosphere 1000.0 10 > th dose independent rect. 6 19
801 100.47 wind 5.0 4320 > th dose independent rect. 8 2
804 100.48 humidity 50.0 90 > th dose independent rect. 5 22
806 100.48 temperature 10.0 90 > th dose dependent rect. 15 14
807 100.49 humidity 70.0 720 > th dose independent rect. 21 10
812 100.49 wind 9.0 720 < th dose dependent rect. 9 2
822 100.53 radiation 10.0 10 < th dose independent rect. 1 5
838 100.56 wind 1.0 30 > th dose independent rect. 5 20
846 100.58 precipitation 0.1 720 < th dose independent rect. 9 10
849 100.58 precipitation 0.1 720 < th dose dependent rect. 9 10
850 100.59 wind 9.0 1440 < th dose independent rect. 2 4
851 100.59 temperature 10.0 1440 > th dose independent rect. 2 4
854 100.59 temperature 30.0 1440 < th dose independent rect. 2 4
858 100.59 humidity 50.0 1440 > th dose independent rect. 2 4
867 100.59 atmosphere 995.0 1440 > th dose independent rect. 2 4
868 100.59 radiation 20.0 1440 < th dose independent rect. 2 4
878 100.59 temperature 10.0 1440 > th dose independent rect. 6 20
881 100.59 precipitation 0.1 270 < th dose independent rect. 2 23
887 100.59 precipitation 0.1 270 < th dose dependent rect. 2 23
888 100.60 radiation 10.0 10 < th dose independent rect. 3 3
889 100.60 temperature 20.0 270 > th dose independent rect. 24 21
890 100.61 precipitation 0.1 270 < th dose independent rect. 1 1
895 100.61 precipitation 0.1 270 < th dose dependent rect. 1 1
897 100.62 wind 9.0 1440 < th dose independent rect. 4 2
898 100.62 temperature 10.0 1440 > th dose independent rect. 4 2
901 100.62 temperature 30.0 1440 < th dose independent rect. 4 2
905 100.62 humidity 50.0 1440 > th dose independent rect. 4 2
914 100.62 atmosphere 995.0 1440 > th dose independent rect. 4 2
915 100.62 atmosphere 1015.0 1440 < th dose independent rect. 4 2
916 100.62 radiation 20.0 1440 < th dose independent rect. 4 2
925 100.62 temperature 10.0 1440 > th dose independent rect. 6 22
928 100.62 temperature 30.0 270 < th dose independent rect. 2 22
930 100.62 radiation 40.0 270 < th dose dependent rect. 19 13
931 100.63 temperature 10.0 270 > th dose independent rect. 1 1
934 100.63 humidity 50.0 270 > th dose independent rect. 1 1
937 100.63 atmosphere 995.0 270 > th dose independent rect. 1 1
938 100.63 atmosphere 1010.0 270 < th dose independent rect. 1 1
940 100.63 radiation 1.0 270 < th dose independent rect. 1 1
945 100.63 temperature 10.0 720 > th dose independent rect. 9 10
946 100.63 atmosphere 1015.0 720 < th dose independent rect. 9 10
947 100.63 temperature 10.0 720 > th dose independent rect. 19 14
948 100.63 humidity 50.0 720 > th dose independent rect. 19 14
949 100.63 atmosphere 995.0 720 > th dose independent rect. 19 14
951 100.63 temperature 10.0 270 > th dose independent rect. 2 23
952 100.63 radiation 1.0 270 < th dose dependent rect. 1 1
960 100.65 radiation 30.0 720 < th dose independent rect. 21 10
967 100.65 radiation 10.0 270 < th dose dependent rect. 4 20
973 100.67 temperature 20.0 10 > th dose independent rect. 1 5
975 100.67 temperature 10.0 720 > th dose independent rect. 21 10
976 100.67 temperature 30.0 720 < th dose independent rect. 21 10
977 100.67 humidity 50.0 720 > th dose independent rect. 21 10
979 100.67 atmosphere 995.0 720 > th dose independent rect. 21 10
982 100.67 temperature 10.0 720 > th dose independent rect. 7 14
985 100.67 temperature 10.0 10 > th dose dependent rect. 1 5
998 100.70 wind 9.0 270 < th dose independent rect. 1 1