Os03g0241400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0241400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.66 | 0.507 | 5.75 | 1.16 | 1.2 | 2.01 | 0.325 | -1.49 | 0.508 | 10.6 | 30.7 | 99 | -- | -- |
| 118.31 | 0.507 | 5.77 | 0.923 | 1.19 | 1.95 | 0.581 | -- | 0.493 | 10.4 | 27.74 | 112 | -- | -- |
| 117.02 | 0.504 | 5.75 | 1.21 | 1.18 | 2.02 | -- | -1.72 | 0.513 | 10.6 | 30.94 | 104 | -- | -- |
| 119.69 | 0.51 | 5.77 | 0.935 | 1.18 | 1.94 | -- | -- | 0.494 | 10.4 | 27.57 | 114 | -- | -- |
| 155.55 | 0.581 | 5.78 | 1.32 | -- | 2.34 | -- | -1.84 | 0.515 | -- | 38.91 | 627 | -- | -- |
| 171.2 | 0.613 | 5.86 | 0.431 | 1.11 | -- | 0.409 | -- | 0.0765 | 8.55 | -- | -- | -- | -- |
| 171.73 | 0.614 | 5.86 | 0.444 | 1.11 | -- | -- | -- | 0.0762 | 8.51 | -- | -- | -- | -- |
| 156.99 | 0.584 | 5.8 | 1.03 | -- | 2.27 | -- | -- | 0.493 | -- | 30.86 | 619 | -- | -- |
| 140.63 | 0.552 | 5.82 | -- | 1.17 | 1.59 | -- | -- | 0.276 | 10.2 | 30.6 | 81 | -- | -- |
| 240.6 | 0.725 | 5.89 | 0.448 | -- | -- | -- | -- | 0.0867 | -- | -- | -- | -- | -- |
| 176.92 | 0.622 | 5.88 | -- | 1.11 | -- | -- | -- | 0.0267 | 8.48 | -- | -- | -- | -- |
| 181.77 | 0.628 | 5.85 | -- | -- | 1.92 | -- | -- | 0.297 | -- | 32.13 | 602 | -- | -- |
| 245.9 | 0.732 | 5.9 | -- | -- | -- | -- | -- | 0.037 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.41 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 3 | 111.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 113.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 14 | 114.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 19 | 115.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 34 | 116.87 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 40 | 117.32 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 49 | 117.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 86 | 119.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 88 | 119.69 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 107 | 120.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 122 | 120.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 194 | 122.93 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 281 | 124.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 310 | 125.22 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 374 | 126.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 482 | 127.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 537 | 128.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 627 | 129.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 18 |
| 777 | 130.67 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 893 | 131.51 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 897 | 131.54 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 999 | 132.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 8 |