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Os03g0240800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AGL157Cp.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0187) R2 : 0.363
β1 : 1.1 (0.0685) R2dD : 0.376 R2D : 0.35
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.105 (0.04) R2dN8 : 0.0129 R2N8 : -0.0133
σ : 0.351
deviance : 56.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.76 0.265 10.5 0.547 0.611 0.0404 0.0791 -2.3 -0.0519 17.2 9.396 5338 -- --
35.45 0.279 10.4 1.05 0.54 0.373 0.0351 -- 0.0679 17.7 11.3 11451 -- --
31.78 0.263 10.5 0.546 0.612 0.0394 -- -2.31 -0.0515 17.2 9.5 5344 -- --
35.45 0.279 10.4 1.05 0.54 0.375 -- -- 0.0677 17.7 6.014 11442 -- --
48.23 0.325 10.5 0.861 -- 0.747 -- -0.794 -0.0231 -- 9.5 5344 -- --
36.75 0.284 10.4 1.13 0.613 -- 0.146 -- 0.12 17.1 -- -- -- --
36.8 0.284 10.4 1.13 0.614 -- -- -- 0.12 17.2 -- -- -- --
48.73 0.327 10.4 0.97 -- 0.735 -- -- 0.00695 -- -3.958 47520 -- --
44.8 0.312 10.5 -- 0.619 0.811 -- -- -0.247 17.1 -29.75 47520 -- --
56.51 0.351 10.4 1.1 -- -- -- -- 0.105 -- -- -- -- --
70.19 0.392 10.5 -- 0.594 -- -- -- -0.00516 17.2 -- -- -- --
64.85 0.375 10.5 -- -- 0.784 -- -- -0.253 -- -14.16 47520 -- --
88.65 0.439 10.4 -- -- -- -- -- -0.0178 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.89 wind 1.0 14400 < th dose independent rect. 20 6
3 29.11 wind 1.0 14400 > th dose independent rect. 20 6
10 29.46 wind 1.0 14400 < th dose dependent rect. 19 7
16 29.69 wind 1.0 43200 > th dose independent rect. 16 10
25 29.88 wind 1.0 14400 < th dose dependent rect. 22 3
28 29.92 radiation 40.0 43200 < th dose independent rect. 16 5
29 29.92 radiation 40.0 43200 < th dose independent rect. 16 7
41 30.00 radiation 1.0 4320 > th dose dependent rect. 6 2
49 30.03 radiation 40.0 4320 < th dose dependent rect. 6 2
74 30.05 radiation 40.0 4320 < th dose dependent rect. 23 9
81 30.06 radiation 40.0 4320 < th dose dependent rect. 1 7
120 30.22 radiation 20.0 4320 < th dose independent rect. 24 8
124 30.22 radiation 40.0 43200 < th dose independent rect. 16 15
126 30.23 radiation 20.0 4320 < th dose independent rect. 2 6
134 30.25 humidity 90.0 43200 > th dose independent rect. 12 1
135 30.25 precipitation 0.1 43200 > th dose independent rect. 12 1
137 30.25 precipitation 0.1 43200 > th dose dependent rect. 12 1
138 30.26 radiation 20.0 4320 < th dose independent rect. 5 3
147 30.29 precipitation 0.1 43200 > th dose independent rect. 10 3
149 30.29 precipitation 0.1 43200 > th dose dependent rect. 10 3
180 30.35 precipitation 0.1 43200 < th dose independent rect. 12 1
182 30.35 wind 1.0 14400 < th dose dependent sin 15 NA
183 30.35 precipitation 0.1 43200 < th dose dependent rect. 12 1
186 30.36 wind 1.0 43200 > th dose independent rect. 21 1
187 30.36 wind 1.0 43200 < th dose independent rect. 21 1
194 30.37 wind 7.0 43200 > th dose dependent rect. 21 2
199 30.38 wind 7.0 43200 < th dose independent rect. 21 3
204 30.39 precipitation 0.1 43200 < th dose independent rect. 9 4
207 30.39 precipitation 0.1 43200 < th dose dependent rect. 9 4
208 30.40 wind 7.0 43200 > th dose independent rect. 21 2
226 30.42 radiation 20.0 43200 < th dose dependent rect. 10 1
240 30.45 humidity 90.0 43200 > th dose dependent rect. 12 1
242 30.46 atmosphere 995.0 43200 > th dose independent rect. 5 4
245 30.46 wind 1.0 43200 < th dose dependent sin 18 NA
252 30.47 wind 1.0 43200 < th dose dependent rect. 19 1
255 30.48 atmosphere 995.0 43200 > th dose independent rect. 6 2
259 30.49 radiation 1.0 43200 < th dose independent rect. 14 1
261 30.49 precipitation 0.1 43200 > th dose independent rect. 6 7
262 30.49 radiation 1.0 43200 < th dose dependent rect. 14 1
263 30.49 precipitation 0.1 43200 > th dose dependent rect. 6 7
264 30.50 wind 9.0 43200 > th dose independent rect. 1 2
270 30.51 radiation 1.0 43200 > th dose independent rect. 14 1
290 30.52 precipitation 0.1 43200 < th dose independent rect. 6 7
293 30.52 precipitation 0.1 43200 < th dose dependent rect. 6 7
302 30.53 wind 9.0 43200 > th dose dependent rect. 1 2
308 30.54 wind 1.0 43200 > th dose independent sin 16 NA
309 30.54 humidity 90.0 43200 < th dose independent rect. 12 1
315 30.55 radiation 10.0 43200 > th dose independent rect. 8 1
323 30.56 atmosphere 995.0 43200 > th dose independent rect. 1 13
324 30.56 atmosphere 995.0 43200 > th dose independent rect. 23 15
326 30.56 atmosphere 995.0 43200 > th dose independent rect. 20 18
336 30.56 atmosphere 995.0 43200 < th dose dependent rect. 18 17
337 30.57 humidity 70.0 43200 > th dose independent rect. 11 1
341 30.57 atmosphere 995.0 43200 > th dose independent rect. 2 11
345 30.57 atmosphere 995.0 43200 < th dose dependent sin 7 NA
351 30.57 atmosphere 995.0 43200 < th dose dependent rect. 22 13
357 30.58 atmosphere 995.0 43200 < th dose independent rect. 5 4
361 30.58 atmosphere 995.0 43200 < th dose independent rect. 4 6
365 30.58 atmosphere 995.0 43200 < th dose independent rect. 23 15
375 30.58 atmosphere 995.0 43200 < th dose dependent rect. 3 6
377 30.58 atmosphere 995.0 43200 < th dose dependent rect. 2 8
389 30.59 atmosphere 995.0 43200 < th dose independent rect. 3 8
413 30.60 wind 1.0 43200 < th dose independent rect. 19 1
439 30.61 humidity 70.0 43200 < th dose independent rect. 11 1
470 30.62 radiation 20.0 4320 < th dose independent sin 10 NA
471 30.62 radiation 20.0 43200 > th dose independent rect. 10 1
472 30.62 radiation 30.0 43200 < th dose independent rect. 5 2
480 30.62 radiation 1.0 43200 < th dose dependent rect. 19 10
498 30.63 radiation 30.0 43200 < th dose independent rect. 18 13
501 30.63 radiation 1.0 43200 < th dose dependent rect. 4 1
521 30.64 wind 1.0 43200 < th dose dependent rect. 21 1
529 30.64 radiation 1.0 43200 < th dose dependent rect. 22 7
531 30.65 atmosphere 995.0 43200 < th dose independent sin 7 NA
533 30.65 humidity 80.0 43200 < th dose independent rect. 7 2
536 30.65 radiation 30.0 43200 < th dose independent rect. 3 4
542 30.65 humidity 90.0 43200 < th dose dependent rect. 8 1
557 30.66 humidity 70.0 43200 > th dose independent rect. 18 1
567 30.66 atmosphere 995.0 43200 < th dose dependent rect. 4 4
568 30.66 radiation 1.0 43200 < th dose dependent rect. 1 4
574 30.67 precipitation 0.1 43200 < th dose independent rect. 9 1
583 30.67 humidity 50.0 43200 > th dose dependent rect. 8 1
585 30.67 precipitation 0.1 43200 > th dose dependent rect. 21 1
586 30.67 precipitation 0.1 43200 < th dose dependent rect. 9 1
607 30.68 wind 1.0 43200 < th dose independent sin 16 NA
635 30.69 radiation 10.0 43200 > th dose independent rect. 6 5
659 30.70 precipitation 0.1 43200 > th dose independent rect. 21 1
667 30.71 atmosphere 995.0 43200 > th dose independent sin 7 NA
669 30.71 humidity 80.0 43200 < th dose independent rect. 5 5
678 30.72 precipitation 0.1 43200 < th dose independent rect. 21 1
683 30.72 precipitation 0.1 43200 < th dose dependent rect. 21 1
734 30.76 humidity 80.0 43200 > th dose independent rect. 5 5
744 30.77 humidity 70.0 43200 > th dose independent rect. 2 13
751 30.78 radiation 10.0 4320 > th dose independent rect. 5 3
801 30.81 humidity 80.0 43200 < th dose independent rect. 4 7
823 30.83 wind 7.0 43200 < th dose independent rect. 9 1
826 30.83 humidity 70.0 43200 < th dose independent rect. 18 6
832 30.83 humidity 70.0 43200 < th dose dependent rect. 13 1
847 30.85 wind 1.0 43200 > th dose independent rect. 19 1
871 30.86 humidity 80.0 43200 > th dose independent rect. 6 3
881 30.86 humidity 90.0 43200 < th dose dependent rect. 8 6
896 30.86 atmosphere 995.0 43200 < th dose dependent rect. 12 23
910 30.87 atmosphere 995.0 43200 < th dose dependent no NA NA
922 30.87 atmosphere 995.0 43200 < th dose dependent rect. 9 21
937 30.88 radiation 10.0 43200 > th dose independent sin 8 NA
958 30.89 humidity 70.0 43200 > th dose independent rect. 18 5
998 30.90 wind 7.0 43200 < th dose independent rect. 21 13