Os03g0238300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol polyphosphate related phosphatase domain containing protein.
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Os03g0238300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inositol polyphosphate related phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.6 | 0.331 | 10.6 | 0.541 | 1.69 | -0.989 | -0.236 | 1.13 | 0.141 | 9.16 | 87.99 | 660 | -- | -- |
| 50.55 | 0.331 | 10.6 | 0.473 | 1.7 | -0.979 | -0.668 | -- | 0.157 | 8.91 | 118.8 | 735 | -- | -- |
| 49.74 | 0.328 | 10.6 | 0.547 | 1.68 | -0.996 | -- | 1.35 | 0.143 | 9.18 | 87.8 | 655 | -- | -- |
| 51.98 | 0.336 | 10.6 | 0.448 | 1.71 | -0.955 | -- | -- | 0.158 | 9.01 | 95 | 713 | -- | -- |
| 137.19 | 0.546 | 10.6 | 0.698 | -- | -2.78 | -- | 2.12 | 0.205 | -- | 200.2 | 726 | -- | -- |
| 63.04 | 0.372 | 10.6 | 0.42 | 2.14 | -- | -0.522 | -- | 0.139 | 8.81 | -- | -- | -- | -- |
| 63.95 | 0.374 | 10.6 | 0.403 | 2.14 | -- | -- | -- | 0.139 | 8.82 | -- | -- | -- | -- |
| 143.05 | 0.557 | 10.6 | 0.523 | -- | -2.71 | -- | -- | 0.194 | -- | 162 | 719 | -- | -- |
| 57.26 | 0.352 | 10.6 | -- | 1.72 | -0.925 | -- | -- | 0.11 | 8.99 | 95 | 707 | -- | -- |
| 325.57 | 0.843 | 10.6 | 0.404 | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
| 68.23 | 0.386 | 10.6 | -- | 2.15 | -- | -- | -- | 0.0941 | 8.81 | -- | -- | -- | -- |
| 150.24 | 0.571 | 10.6 | -- | -- | -2.69 | -- | -- | 0.136 | -- | 179.8 | 719 | -- | -- |
| 329.89 | 0.848 | 10.6 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.59 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 2 | 45.25 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 18 |
| 3 | 45.28 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 13 | 46.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 29 | 46.60 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 40 | 46.86 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 16 |
| 61 | 47.12 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 14 |
| 91 | 47.46 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 93 | 47.47 | humidity | 80.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 110 | 47.67 | humidity | 80.0 | 90 | < th | dose independent | rect. | 16 | 20 |
| 118 | 47.72 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 149 | 47.86 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 164 | 47.95 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 166 | 47.98 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 170 | 48.02 | humidity | 80.0 | 90 | < th | dose independent | rect. | 17 | 18 |
| 186 | 48.13 | humidity | 70.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 198 | 48.19 | humidity | 80.0 | 720 | > th | dose independent | sin | 0 | NA |
| 202 | 48.22 | radiation | 1.0 | 720 | < th | dose independent | rect. | 4 | 19 |
| 213 | 48.27 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 230 | 48.35 | humidity | 90.0 | 720 | < th | dose dependent | sin | 2 | NA |
| 235 | 48.37 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 248 | 48.47 | humidity | 50.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 270 | 48.55 | humidity | 80.0 | 720 | < th | dose independent | sin | 1 | NA |
| 330 | 48.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 335 | 48.83 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 2 |
| 356 | 48.91 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 357 | 48.91 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 19 |
| 378 | 49.00 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 17 |
| 379 | 49.00 | humidity | 50.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 388 | 49.01 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 403 | 49.09 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 415 | 49.12 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 436 | 49.16 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 3 |
| 437 | 49.16 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 514 | 49.38 | humidity | 70.0 | 720 | > th | dose independent | rect. | 11 | 20 |
| 590 | 49.59 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 615 | 49.67 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 660 | 49.76 | humidity | 70.0 | 720 | > th | dose independent | rect. | 11 | 12 |
| 715 | 49.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 13 |
| 718 | 49.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 13 |
| 751 | 49.96 | humidity | 90.0 | 720 | < th | dose dependent | no | NA | NA |
| 756 | 49.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 20 |
| 758 | 49.98 | humidity | 50.0 | 720 | > th | dose dependent | no | NA | NA |
| 760 | 49.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 767 | 50.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 13 |
| 867 | 50.18 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 11 |
| 910 | 50.24 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 4 |
| 936 | 50.29 | humidity | 90.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 956 | 50.33 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 8 |