Os03g0237600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MAP65/ASE1 family protein.
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Os03g0237600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MAP65/ASE1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.42 | 0.302 | 9.29 | -0.254 | 0.42 | 0.82 | 0.0954 | 1.15 | -0.0442 | 16.5 | 18.59 | 785 | -- | -- |
| 42.31 | 0.303 | 9.31 | -0.409 | 0.561 | 0.638 | 0.313 | -- | -0.0496 | 17 | 20.99 | 1114 | -- | -- |
| 41.44 | 0.3 | 9.29 | -0.25 | 0.423 | 0.814 | -- | 1.15 | -0.0429 | 16.5 | 18.7 | 790 | -- | -- |
| 42.06 | 0.302 | 9.33 | -0.502 | 0.58 | 0.727 | -- | -- | -0.109 | 17.1 | 20.69 | 1132 | -- | -- |
| 44.34 | 0.31 | 9.31 | -0.383 | -- | 1.07 | -- | 0.798 | -0.108 | -- | 18.6 | 442 | -- | -- |
| 56.76 | 0.353 | 9.29 | -0.257 | 0.551 | -- | 0.338 | -- | 0.044 | 18.1 | -- | -- | -- | -- |
| 57.04 | 0.354 | 9.29 | -0.26 | 0.553 | -- | -- | -- | 0.0453 | 18 | -- | -- | -- | -- |
| 44.78 | 0.312 | 9.32 | -0.537 | -- | 1.11 | -- | -- | -0.155 | -- | 18.8 | 436 | -- | -- |
| 47.79 | 0.322 | 9.31 | -- | 0.589 | 0.575 | -- | -- | -0.025 | 17.3 | 21.95 | 1150 | -- | -- |
| 72.86 | 0.399 | 9.28 | -0.276 | -- | -- | -- | -- | 0.0328 | -- | -- | -- | -- | -- |
| 58.82 | 0.359 | 9.29 | -- | 0.556 | -- | -- | -- | 0.0743 | 18 | -- | -- | -- | -- |
| 51.53 | 0.334 | 9.31 | -- | -- | 0.924 | -- | -- | -0.0692 | -- | 20.6 | 429 | -- | -- |
| 74.87 | 0.404 | 9.28 | -- | -- | -- | -- | -- | 0.0634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.84 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 10 | 40.02 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 16 | 40.12 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 27 | 40.32 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 145 | 41.19 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 160 | 41.26 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 195 | 41.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 223 | 41.53 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 229 | 41.53 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 258 | 41.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 263 | 41.61 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 264 | 41.61 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 275 | 41.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 277 | 41.66 | temperature | 15.0 | 720 | > th | dose dependent | no | NA | NA |
| 287 | 41.67 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 296 | 41.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 298 | 41.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 325 | 41.75 | temperature | 30.0 | 720 | < th | dose dependent | no | NA | NA |
| 366 | 41.81 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 374 | 41.82 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 436 | 41.90 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 459 | 41.94 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 462 | 41.94 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 473 | 41.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 529 | 42.00 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 698 | 42.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 721 | 42.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 731 | 42.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 765 | 42.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 830 | 42.26 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 853 | 42.29 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 878 | 42.31 | temperature | 30.0 | 720 | < th | dose dependent | sin | 13 | NA |