Os03g0237500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF775 family protein.
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Os03g0237500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF775 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.2 | 0.62 | 7.86 | 1.66 | 3.14 | -2.53 | 1.07 | -1.18 | 0.384 | 9.27 | 7.705 | 49 | 20.2 | -- |
| 175.36 | 0.617 | 7.86 | 1.69 | 3.15 | -2.58 | 1.04 | -- | 0.377 | 9.19 | 7.333 | 51 | 20.4 | -- |
| 177.99 | 0.621 | 7.86 | 1.69 | 3.13 | -2.55 | -- | -0.993 | 0.38 | 9.25 | 7.173 | 51 | 20.2 | -- |
| 178.72 | 0.623 | 7.86 | 1.71 | 3.19 | -2.6 | -- | -- | 0.395 | 9.13 | 6.502 | 62 | 20.5 | -- |
| 299.1 | 0.81 | 7.93 | 1.63 | -- | -2.75 | -- | -0.962 | 0.485 | -- | 20.64 | 7 | 7.94 | -- |
| 280.2 | 0.785 | 7.84 | 1.62 | 3.02 | -- | 0.886 | -- | 0.528 | 10.5 | -- | -- | -- | -- |
| 283.4 | 0.788 | 7.84 | 1.66 | 3.01 | -- | -- | -- | 0.53 | 10.5 | -- | -- | -- | -- |
| 283.47 | 0.784 | 7.92 | 1.69 | -- | -2.98 | -- | -- | 0.512 | -- | 336.5 | 2 | 7.57 | -- |
| 252.06 | 0.739 | 7.91 | -- | 3.24 | -2.5 | -- | -- | 0.212 | 8.96 | 3.548 | 101 | 20.6 | -- |
| 839.12 | 1.35 | 7.92 | 1.6 | -- | -- | -- | -- | 0.518 | -- | -- | -- | -- | -- |
| 355.64 | 0.882 | 7.88 | -- | 3 | -- | -- | -- | 0.346 | 10.4 | -- | -- | -- | -- |
| 355.39 | 0.878 | 7.96 | -- | -- | -2.97 | -- | -- | 0.34 | -- | 294.5 | 2 | 7.63 | -- |
| 907.01 | 1.41 | 7.96 | -- | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 16 | 178.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 22 | 181.59 | radiation | 10.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 23 | 181.63 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 26 | 182.42 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 41 | 186.55 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 42 | 186.56 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 16 |
| 54 | 188.33 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 58 | 188.59 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 94 | 191.54 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 106 | 192.63 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 122 | 193.44 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 133 | 194.14 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 137 | 194.29 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 145 | 194.58 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 157 | 195.17 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 168 | 195.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 183 | 195.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 193 | 196.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 219 | 197.27 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 235 | 197.71 | temperature | 25.0 | 30 | > th | dose independent | sin | 5 | NA |
| 240 | 198.04 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 4 |
| 241 | 198.04 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 243 | 198.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 257 | 198.43 | wind | 7.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 272 | 198.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 274 | 198.63 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 275 | 198.63 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 278 | 198.63 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 279 | 198.63 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 281 | 198.63 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 284 | 198.63 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 285 | 198.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 2 |
| 286 | 198.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 292 | 198.89 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 294 | 198.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 296 | 198.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 297 | 198.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 300 | 198.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 301 | 198.89 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 303 | 198.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 308 | 198.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 309 | 198.89 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 320 | 199.10 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 321 | 199.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 334 | 199.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 335 | 199.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 349 | 199.56 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 350 | 199.56 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 368 | 199.64 | temperature | 25.0 | 30 | < th | dose independent | sin | 5 | NA |
| 400 | 200.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 405 | 200.25 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 406 | 200.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 409 | 200.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 413 | 200.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 418 | 200.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 419 | 200.25 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 424 | 200.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 453 | 200.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 511 | 201.65 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 546 | 201.95 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 547 | 201.95 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 10 |
| 566 | 202.26 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 568 | 202.27 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 16 |
| 588 | 202.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 593 | 202.66 | temperature | 30.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 610 | 203.04 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 626 | 203.28 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 629 | 203.30 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 664 | 203.45 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 672 | 203.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 675 | 203.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 683 | 203.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 7 |
| 686 | 203.73 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 689 | 203.77 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 705 | 204.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 719 | 204.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 732 | 204.39 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 734 | 204.39 | temperature | 15.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 752 | 204.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 759 | 204.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 804 | 204.80 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 821 | 204.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 897 | 205.65 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 913 | 205.80 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 918 | 205.88 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 924 | 205.93 | radiation | 20.0 | 30 | < th | dose independent | rect. | 13 | 17 |
| 943 | 206.10 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 955 | 206.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 956 | 206.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 957 | 206.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 959 | 206.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 999 | 206.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 14 |