Os03g0235900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nitrate transporter.
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Os03g0235900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nitrate transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.09 | 0.322 | 9.52 | -0.0498 | 0.397 | -1.36 | 0.517 | -0.0673 | 0.092 | 2.63 | 0.7431 | 1433 | -- | -- |
| 47.09 | 0.32 | 9.52 | -0.0557 | 0.399 | -1.35 | 0.518 | -- | 0.0919 | 2.61 | 0.7441 | 1434 | -- | -- |
| 48.01 | 0.323 | 9.52 | -0.0601 | 0.408 | -1.43 | -- | -0.23 | 0.0865 | 2.56 | 0.6996 | 1437 | -- | -- |
| 48.03 | 0.323 | 9.53 | -0.0727 | 0.409 | -1.36 | -- | -- | 0.0886 | 2.54 | 0.7448 | 1437 | -- | -- |
| 54.35 | 0.343 | 9.52 | -0.0295 | -- | -1.43 | -- | -0.176 | 0.101 | -- | 0.8616 | 1382 | -- | -- |
| 67.14 | 0.384 | 9.48 | 0.285 | 0.414 | -- | 0.659 | -- | 0.267 | 2.54 | -- | -- | -- | -- |
| 68.69 | 0.388 | 9.49 | 0.268 | 0.416 | -- | -- | -- | 0.263 | 2.58 | -- | -- | -- | -- |
| 54.44 | 0.344 | 9.52 | -0.0552 | -- | -1.41 | -- | -- | 0.0997 | -- | 0.94 | 1382 | -- | -- |
| 48.15 | 0.323 | 9.52 | -- | 0.414 | -1.33 | -- | -- | 0.0956 | 2.53 | 0.7599 | 1437 | -- | -- |
| 78.85 | 0.415 | 9.48 | 0.285 | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
| 70.58 | 0.393 | 9.49 | -- | 0.422 | -- | -- | -- | 0.234 | 2.59 | -- | -- | -- | -- |
| 54.51 | 0.344 | 9.52 | -- | -- | -1.38 | -- | -- | 0.108 | -- | 0.9729 | 1382 | -- | -- |
| 80.99 | 0.42 | 9.49 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.93 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 2 | 45.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 3 | 45.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 6 | 45.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 12 | 45.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 18 | 45.61 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 31 | 45.76 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 36 | 45.78 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 76 | 46.20 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 122 | 46.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 14 |
| 130 | 46.60 | radiation | 1 | 1440 | > th | dose independent | sin | 20 | NA |
| 132 | 46.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 144 | 46.63 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 165 | 46.74 | radiation | 1 | 1440 | < th | dose independent | sin | 20 | NA |
| 186 | 46.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 197 | 46.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 240 | 47.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 248 | 47.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 250 | 47.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 8 |
| 268 | 47.11 | temperature | 25 | 1440 | > th | dose independent | sin | 20 | NA |
| 304 | 47.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 309 | 47.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 315 | 47.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 330 | 47.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 336 | 47.26 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 339 | 47.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 21 |
| 361 | 47.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 404 | 47.31 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 414 | 47.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 438 | 47.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 502 | 47.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 515 | 47.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 564 | 47.88 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 597 | 47.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 650 | 48.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 670 | 48.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 713 | 48.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 750 | 48.33 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 755 | 48.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 760 | 48.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 808 | 48.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 824 | 48.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 831 | 48.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 896 | 48.57 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 936 | 48.62 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 965 | 48.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 971 | 48.68 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 974 | 48.68 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 23 |