Os03g0235700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide transporter 1.
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Os03g0235700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peptide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.82 | 0.61 | 5.74 | -3.2 | 0.742 | -0.104 | 1.05 | -3.59 | -0.36 | 5.9 | 999.1 | 10049 | -- | -- |
| 172.7 | 0.612 | 5.71 | -3.04 | 0.72 | -0.727 | 1.29 | -- | -0.394 | 5.51 | 999.3 | 11458 | -- | -- |
| 171.03 | 0.609 | 5.74 | -3.18 | 0.747 | -0.104 | -- | -3.64 | -0.364 | 6.34 | 999 | 10009 | -- | -- |
| 174.27 | 0.615 | 5.71 | -3.01 | 0.751 | -0.784 | -- | -- | -0.394 | 6.35 | 998.9 | 10750 | -- | -- |
| 200.47 | 0.659 | 5.75 | -3.15 | -- | -0.151 | -- | -3.55 | -0.345 | -- | 999 | 9970 | -- | -- |
| 185.14 | 0.638 | 5.69 | -3.17 | 0.748 | -- | 1.08 | -- | -0.323 | 5.86 | -- | -- | -- | -- |
| 187.52 | 0.641 | 5.69 | -3.15 | 0.759 | -- | -- | -- | -0.326 | 6.31 | -- | -- | -- | -- |
| 203.55 | 0.664 | 5.72 | -2.98 | -- | -0.792 | -- | -- | -0.38 | -- | 998.9 | 10909 | -- | -- |
| 380.87 | 0.909 | 5.73 | -- | 0.645 | -1.15 | -- | -- | -0.475 | 6.15 | 999 | 41957 | -- | -- |
| 217.44 | 0.689 | 5.71 | -3.13 | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
| 449.83 | 0.992 | 5.62 | -- | 0.717 | -- | -- | -- | 0.025 | 6.54 | -- | -- | -- | -- |
| 405.01 | 0.937 | 5.75 | -- | -- | -1.2 | -- | -- | -0.49 | -- | 999 | 41877 | -- | -- |
| 476.61 | 1.02 | 5.63 | -- | -- | -- | -- | -- | 0.0378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.09 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 9 |
| 3 | 163.40 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 4 | 163.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 7 | 163.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 9 | 163.80 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 15 | 164.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 16 | 164.91 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 18 | 164.96 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 20 | 165.23 | wind | 5.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 21 | 165.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 24 | 165.30 | temperature | 20.0 | 30 | > th | dose independent | sin | 4 | NA |
| 30 | 165.36 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 32 | 165.47 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 36 | 165.48 | wind | 1.0 | 720 | > th | dose dependent | rect. | 2 | 4 |
| 44 | 165.69 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 60 | 165.89 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 65 | 165.94 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 67 | 165.96 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 78 | 166.05 | temperature | 25.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 98 | 166.24 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 99 | 166.24 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 100 | 166.25 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 104 | 166.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 105 | 166.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 108 | 166.31 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 121 | 166.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 146 | 166.52 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 154 | 166.57 | wind | 5.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 160 | 166.60 | wind | 3.0 | 720 | > th | dose independent | rect. | 2 | 3 |
| 161 | 166.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 175 | 166.69 | wind | 5.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 189 | 166.78 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 198 | 166.81 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 210 | 166.86 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 211 | 166.86 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 221 | 166.88 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 226 | 166.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 247 | 167.01 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 271 | 167.12 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 279 | 167.16 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 307 | 167.28 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 336 | 167.36 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 358 | 167.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 363 | 167.45 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 376 | 167.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 417 | 167.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 12 |
| 437 | 167.67 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 446 | 167.71 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 447 | 167.72 | wind | 5.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 454 | 167.74 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 468 | 167.77 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 494 | 167.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 500 | 167.85 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 526 | 167.90 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 538 | 167.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 544 | 167.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 545 | 167.94 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 550 | 167.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 562 | 167.99 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 581 | 168.03 | wind | 1.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 598 | 168.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 642 | 168.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 655 | 168.15 | wind | 5.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 728 | 168.30 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 731 | 168.30 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 17 |
| 747 | 168.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 771 | 168.36 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 794 | 168.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 824 | 168.44 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 829 | 168.45 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 836 | 168.48 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 838 | 168.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 840 | 168.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 884 | 168.55 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 921 | 168.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 950 | 168.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 967 | 168.64 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 21 |