Os03g0232800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lecithin:cholesterol acyltransferase family protein.
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Os03g0232800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lecithin:cholesterol acyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.77 | 0.741 | 9.12 | -1.33 | 5.15 | -1.6 | -0.704 | -1.2 | -1.46 | 11.7 | 71.98 | 1300 | -- | -- |
| 251.78 | 0.739 | 9.13 | -1.44 | 5.13 | -1.62 | -0.871 | -- | -1.49 | 11.7 | 71.91 | 1282 | -- | -- |
| 250.16 | 0.737 | 9.12 | -1.33 | 5.22 | -1.6 | -- | -1.38 | -1.46 | 11.7 | 71 | 1261 | -- | -- |
| 254.02 | 0.742 | 9.14 | -1.56 | 5.18 | -1.67 | -- | -- | -1.49 | 11.7 | 70.82 | 1280 | -- | -- |
| 1217.62 | 1.63 | 9.21 | -1.57 | -- | -2.54 | -- | 0.347 | -1.34 | -- | 74 | 1590 | -- | -- |
| 352.52 | 0.88 | 9.09 | -1.17 | 4.9 | -- | -1.18 | -- | -1.26 | 11.6 | -- | -- | -- | -- |
| 358.52 | 0.887 | 9.09 | -1.21 | 4.91 | -- | -- | -- | -1.26 | 11.6 | -- | -- | -- | -- |
| 1218.32 | 1.63 | 9.21 | -1.55 | -- | -2.54 | -- | -- | -1.34 | -- | 74 | 1590 | -- | -- |
| 316.68 | 0.829 | 9.11 | -- | 5.11 | -1.47 | -- | -- | -1.33 | 11.7 | 71.01 | 1291 | -- | -- |
| 1872.85 | 2.02 | 9.2 | -1.35 | -- | -- | -- | -- | -1.32 | -- | -- | -- | -- | -- |
| 397.31 | 0.932 | 9.06 | -- | 4.92 | -- | -- | -- | -1.13 | 11.6 | -- | -- | -- | -- |
| 1281.96 | 1.67 | 9.17 | -- | -- | -2.51 | -- | -- | -1.17 | -- | 74 | 1590 | -- | -- |
| 1920.98 | 2.05 | 9.17 | -- | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.77 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 3 | 251.99 | humidity | 70.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 7 | 252.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 11 | 253.70 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 14 | 253.83 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 17 | 253.84 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 24 | 253.95 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 25 | 253.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 26 | 253.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 30 | 254.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 9 |
| 33 | 254.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 40 | 254.24 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 44 | 254.76 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 48 | 254.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 13 |
| 49 | 254.86 | humidity | 70.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 52 | 254.94 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 54 | 254.99 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 55 | 255.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 56 | 255.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 83 | 255.20 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 100 | 255.51 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 101 | 255.55 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 113 | 255.73 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 118 | 255.77 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 125 | 255.94 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 128 | 256.04 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 13 | 7 |
| 153 | 256.35 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 157 | 256.41 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 158 | 256.42 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 175 | 256.61 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 185 | 256.79 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 187 | 256.81 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 189 | 256.85 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 211 | 257.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 11 |
| 233 | 257.12 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 240 | 257.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 277 | 257.17 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 282 | 257.17 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 296 | 257.18 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 304 | 257.20 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 337 | 257.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 357 | 257.45 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 383 | 257.74 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 398 | 257.87 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 407 | 257.97 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 409 | 258.03 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 417 | 258.13 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 421 | 258.14 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 431 | 258.23 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 465 | 258.47 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 482 | 258.55 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 498 | 258.60 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 534 | 258.98 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 601 | 259.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 641 | 259.64 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 650 | 259.69 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 696 | 259.89 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 697 | 259.89 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 814 | 260.14 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 836 | 260.27 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 838 | 260.27 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 882 | 260.43 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 947 | 260.59 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 987 | 260.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |