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Os03g0232000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0171) R2 : 0.0374
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.151 (0.0359) R2dN8 : 0.0483 R2N8 : 0.0374
σ : 0.321
deviance : 47.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.05 0.27 11.1 0.613 0.306 -0.463 0.675 -1.26 -0.0687 11.2 8.109 74 -- --
34.59 0.276 11.1 0.61 0.258 -0.355 0.144 -- -0.0878 10.8 8.109 74 -- --
34.08 0.272 11.1 0.61 0.242 -0.435 -- -0.823 -0.0749 11.1 18.36 86 -- --
34.67 0.276 11.1 0.616 0.257 -0.356 -- -- -0.0872 10.9 8.109 74 -- --
35.77 0.279 11.1 0.595 -- -0.376 -- -1.34 -0.072 -- 43.06 150 -- --
36.64 0.284 11.1 0.6 0.124 -- 0.219 -- -0.0849 8.59 -- -- -- --
36.78 0.284 11.1 0.607 0.123 -- -- -- -0.0846 8.96 -- -- -- --
36.94 0.284 11.1 0.606 -- -0.175 -- -- -0.0859 -- 21.93 151 -- --
44.38 0.31 11.1 -- 0.286 -0.401 -- -- -0.139 11.1 4.482 68 -- --
37.65 0.287 11.1 0.607 -- -- -- -- -0.0838 -- -- -- -- --
46.5 0.319 11.1 -- 0.124 -- -- -- -0.152 8.59 -- -- -- --
46.25 0.317 11.1 -- -- -0.273 -- -- -0.144 -- 37 151 -- --
47.37 0.321 11.1 -- -- -- -- -- -0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.45 radiation 40.0 90 < th dose dependent rect. 5 14
2 31.66 radiation 40.0 90 < th dose independent rect. 5 14
3 31.69 atmosphere 1000.0 90 > th dose independent rect. 5 14
4 31.71 temperature 15.0 30 > th dose dependent rect. 20 8
7 31.72 temperature 10.0 30 > th dose dependent rect. 20 19
12 31.78 radiation 40.0 10 < th dose dependent rect. 23 21
13 31.79 temperature 20.0 30 > th dose independent rect. 20 8
23 31.89 radiation 40.0 10 < th dose dependent rect. 6 14
28 31.95 humidity 70.0 90 > th dose independent rect. 19 10
33 32.07 radiation 30.0 10 < th dose independent rect. 23 21
40 32.15 temperature 20.0 30 > th dose dependent rect. 9 6
44 32.16 radiation 20.0 90 < th dose independent rect. 5 14
50 32.19 radiation 40.0 90 < th dose dependent rect. 21 23
54 32.21 atmosphere 1015.0 30 < th dose dependent rect. 20 19
60 32.24 atmosphere 1015.0 30 < th dose dependent rect. 9 6
81 32.33 precipitation 0.1 90 < th dose independent rect. 5 14
84 32.33 precipitation 0.1 90 < th dose dependent rect. 5 14
85 32.36 temperature 15.0 90 > th dose independent rect. 5 14
86 32.36 radiation 40.0 90 < th dose independent rect. 23 20
88 32.39 radiation 1.0 90 < th dose independent rect. 19 10
91 32.39 radiation 10.0 90 < th dose dependent rect. 19 10
92 32.40 atmosphere 1010.0 30 < th dose independent rect. 20 9
93 32.40 wind 9.0 90 < th dose independent rect. 19 10
95 32.40 temperature 30.0 90 < th dose independent rect. 19 10
96 32.40 humidity 50.0 90 > th dose independent rect. 19 10
98 32.40 atmosphere 995.0 90 > th dose independent rect. 19 10
103 32.40 atmosphere 1015.0 90 < th dose independent rect. 5 14
110 32.42 radiation 10.0 270 < th dose independent rect. 17 10
111 32.43 temperature 25.0 270 > th dose dependent rect. 9 1
113 32.45 radiation 40.0 90 < th dose independent rect. 21 23
121 32.48 temperature 15.0 270 > th dose independent rect. 17 10
123 32.49 temperature 10.0 43200 > th dose independent rect. 10 6
128 32.49 atmosphere 995.0 90 > th dose dependent rect. 5 14
132 32.50 atmosphere 1015.0 30 < th dose dependent rect. 20 9
145 32.53 humidity 60.0 270 > th dose independent rect. 17 10
150 32.54 temperature 15.0 10 > th dose independent rect. 20 19
156 32.57 radiation 40.0 10 < th dose independent rect. 5 15
157 32.57 radiation 10.0 270 < th dose dependent rect. 17 10
162 32.58 temperature 25.0 270 > th dose dependent rect. 19 17
172 32.60 temperature 25.0 270 > th dose dependent rect. 7 4
183 32.62 precipitation 0.1 30 < th dose independent rect. 15 5
186 32.62 precipitation 0.1 30 < th dose dependent rect. 15 5
189 32.63 wind 1.0 270 < th dose independent rect. 23 3
190 32.63 humidity 80.0 90 < th dose independent rect. 20 19
194 32.64 wind 1.0 270 > th dose independent rect. 14 17
201 32.65 wind 9.0 90 < th dose independent rect. 5 14
208 32.66 radiation 1.0 270 > th dose dependent sin 7 NA
212 32.67 wind 9.0 270 < th dose independent rect. 17 10
213 32.67 radiation 10.0 10 < th dose dependent rect. 20 10
215 32.68 humidity 90.0 4320 > th dose dependent rect. 5 5
229 32.71 humidity 50.0 270 > th dose independent rect. 6 22
244 32.73 humidity 90.0 4320 > th dose dependent rect. 6 2
249 32.74 humidity 80.0 90 < th dose independent rect. 7 8
250 32.74 temperature 10.0 1440 > th dose independent rect. 21 9
254 32.74 temperature 30.0 1440 < th dose independent rect. 21 9
258 32.74 humidity 50.0 1440 > th dose independent rect. 21 9
264 32.74 atmosphere 995.0 1440 > th dose independent rect. 21 9
265 32.74 radiation 20.0 1440 < th dose independent rect. 21 9
274 32.74 temperature 10.0 1440 > th dose independent rect. 6 15
281 32.74 temperature 10.0 10 > th dose dependent rect. 20 21
288 32.75 temperature 10.0 270 > th dose independent rect. 3 14
289 32.75 atmosphere 1015.0 270 < th dose independent rect. 3 14
293 32.76 atmosphere 1000.0 10 > th dose independent rect. 15 5
296 32.76 humidity 50.0 30 > th dose independent rect. 20 19
301 32.77 atmosphere 1000.0 270 > th dose independent rect. 15 1
309 32.78 radiation 1.0 10 < th dose independent rect. 20 10
311 32.78 humidity 50.0 270 > th dose independent rect. 7 20
327 32.80 precipitation 0.1 30 < th dose independent rect. 15 18
330 32.80 radiation 40.0 10 < th dose dependent rect. 12 8
335 32.80 precipitation 0.1 30 < th dose dependent rect. 15 18
352 32.82 radiation 1.0 270 > th dose dependent rect. 5 7
355 32.82 radiation 1.0 90 > th dose dependent rect. 7 8
371 32.83 radiation 40.0 4320 < th dose dependent rect. 18 2
393 32.85 temperature 20.0 10 > th dose independent rect. 15 5
397 32.85 humidity 80.0 90 < th dose independent rect. 1 14
418 32.87 wind 1.0 10 > th dose independent rect. 9 6
422 32.87 atmosphere 1015.0 270 < th dose dependent rect. 9 1
430 32.88 humidity 90.0 14400 > th dose independent rect. 6 1
431 32.88 humidity 80.0 90 < th dose independent rect. 3 12
469 32.90 atmosphere 1005.0 720 > th dose independent rect. 21 3
471 32.90 wind 5.0 10 < th dose independent rect. 23 10
496 32.92 precipitation 0.1 270 < th dose independent rect. 3 14
498 32.92 radiation 40.0 90 < th dose dependent rect. 13 6
504 32.92 precipitation 0.1 270 < th dose dependent rect. 3 14
525 32.94 temperature 10.0 10 > th dose independent rect. 15 5
527 32.94 atmosphere 1010.0 10 < th dose independent rect. 15 5
543 32.94 wind 9.0 10 < th dose independent rect. 20 19
546 32.94 atmosphere 995.0 10 > th dose independent rect. 20 19
554 32.94 humidity 50.0 90 > th dose dependent rect. 19 10
560 32.95 radiation 40.0 10 < th dose independent rect. 15 5
566 32.95 radiation 40.0 270 < th dose dependent sin 7 NA
569 32.95 radiation 40.0 30 < th dose dependent rect. 15 5
589 32.96 wind 1.0 10 > th dose independent rect. 15 5
590 32.96 temperature 10.0 1440 > th dose independent rect. 16 5
603 32.96 atmosphere 995.0 10 > th dose independent rect. 15 18
605 32.96 temperature 10.0 1440 > th dose independent rect. 21 19
608 32.96 wind 9.0 270 < th dose independent rect. 16 23
619 32.97 wind 1.0 270 > th dose independent rect. 3 15
622 32.97 radiation 1.0 90 > th dose dependent sin 2 NA
624 32.97 temperature 10.0 10 > th dose dependent rect. 9 14
641 32.99 precipitation 0.1 30 < th dose independent rect. 20 9
648 32.99 precipitation 0.1 30 < th dose dependent rect. 20 9
652 32.99 radiation 10.0 90 > th dose dependent rect. 16 23
654 33.00 wind 9.0 30 < th dose independent rect. 15 5
657 33.00 humidity 50.0 270 > th dose independent rect. 8 18
669 33.01 radiation 30.0 10 < th dose independent rect. 12 8
681 33.01 wind 9.0 270 < th dose independent rect. 3 14
686 33.01 atmosphere 1015.0 10 < th dose independent rect. 20 19
690 33.01 radiation 10.0 43200 < th dose dependent rect. 20 7
703 33.01 atmosphere 995.0 10 > th dose dependent rect. 15 18
712 33.02 wind 5.0 10 < th dose independent rect. 23 21
722 33.03 humidity 50.0 30 > th dose independent rect. 9 6
728 33.03 radiation 10.0 43200 < th dose dependent rect. 21 3
732 33.03 radiation 40.0 10 < th dose dependent rect. 10 10
733 33.03 radiation 40.0 270 < th dose dependent rect. 2 15
752 33.04 atmosphere 995.0 10 > th dose dependent rect. 17 16
760 33.05 humidity 50.0 270 > th dose independent rect. 16 23
770 33.05 radiation 40.0 90 < th dose dependent rect. 14 19
774 33.06 temperature 20.0 270 > th dose independent rect. 15 1
784 33.06 precipitation 0.1 30 < th dose independent rect. 20 19
796 33.06 precipitation 0.1 30 < th dose dependent rect. 20 19
806 33.07 atmosphere 995.0 10 > th dose dependent rect. 15 5
816 33.08 humidity 90.0 14400 < th dose independent rect. 6 2
821 33.08 temperature 30.0 30 < th dose independent rect. 5 15
824 33.08 humidity 50.0 30 > th dose independent rect. 20 21
835 33.09 precipitation 0.1 14400 < th dose independent rect. 13 1
836 33.09 wind 1.0 270 > th dose independent rect. 3 4
837 33.09 radiation 40.0 4320 < th dose independent rect. 16 4
839 33.09 radiation 1.0 10 > th dose independent rect. 9 6
844 33.09 precipitation 0.1 14400 < th dose dependent rect. 13 1
850 33.10 precipitation 0.1 14400 > th dose independent rect. 13 1
851 33.10 humidity 80.0 4320 < th dose independent rect. 21 3
883 33.11 humidity 90.0 10 < th dose independent rect. 9 6
926 33.13 temperature 10.0 270 > th dose independent rect. 15 1
928 33.13 atmosphere 1010.0 270 < th dose independent rect. 15 1
930 33.13 precipitation 0.1 270 < th dose independent rect. 15 1
931 33.13 wind 9.0 30 < th dose independent rect. 9 6
933 33.13 humidity 50.0 30 > th dose independent rect. 9 8
947 33.13 temperature 10.0 270 > th dose independent rect. 16 23
948 33.13 precipitation 0.1 270 < th dose dependent rect. 15 1
959 33.13 temperature 10.0 10 > th dose dependent rect. 9 19
964 33.14 precipitation 0.1 30 < th dose independent rect. 9 6
966 33.14 wind 1.0 270 < th dose independent rect. 16 10
967 33.14 wind 1.0 30 > th dose independent rect. 5 15
970 33.14 radiation 20.0 90 < th dose independent rect. 14 18
976 33.14 precipitation 0.1 30 < th dose dependent rect. 9 6
999 33.15 temperature 10.0 30 > th dose independent rect. 9 6