Os03g0231300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0231300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.06 | 0.558 | 6.87 | 1.25 | 1.43 | -1.06 | -0.246 | 1.36 | 0.259 | 2.36 | 25.7 | 925 | -- | -- |
| 143.2 | 0.557 | 6.9 | 0.888 | 1.44 | -1.03 | -0.0262 | -- | 0.18 | 2.36 | 25.6 | 932 | -- | -- |
| 141.27 | 0.554 | 6.87 | 1.25 | 1.43 | -1.06 | -- | 1.3 | 0.258 | 2.35 | 25.7 | 925 | -- | -- |
| 143.05 | 0.557 | 6.91 | 0.898 | 1.41 | -0.983 | -- | -- | 0.152 | 2.42 | 25.7 | 932 | -- | -- |
| 190.04 | 0.646 | 6.93 | 0.61 | -- | -0.78 | -- | -0.782 | 0.0554 | -- | 25.7 | 925 | -- | -- |
| 169.69 | 0.611 | 6.98 | 0.596 | 1.25 | -- | -0.132 | -- | -0.197 | 3.32 | -- | -- | -- | -- |
| 169.75 | 0.61 | 6.98 | 0.599 | 1.25 | -- | -- | -- | -0.196 | 3.31 | -- | -- | -- | -- |
| 192.74 | 0.649 | 6.92 | 0.793 | -- | -0.798 | -- | -- | 0.108 | -- | 25.7 | 925 | -- | -- |
| 162.76 | 0.594 | 6.91 | -- | 1.36 | -0.797 | -- | -- | 0.0687 | 2.42 | 25.5 | 905 | -- | -- |
| 258.35 | 0.751 | 6.98 | 0.652 | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
| 179.19 | 0.626 | 7 | -- | 1.26 | -- | -- | -- | -0.263 | 3.31 | -- | -- | -- | -- |
| 207.02 | 0.672 | 6.92 | -- | -- | -0.801 | -- | -- | 0.111 | -- | 25.5 | 905 | -- | -- |
| 269.56 | 0.766 | 7 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 3 | 131.39 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 14 | 132.96 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 14 |
| 74 | 137.04 | temperature | 20.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 97 | 137.77 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 132 | 138.72 | temperature | 30.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 215 | 140.69 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 237 | 141.11 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 275 | 141.64 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 9 |
| 291 | 141.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 348 | 142.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 8 |
| 369 | 142.93 | temperature | 25.0 | 720 | > th | dose independent | sin | 18 | NA |
| 383 | 143.10 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 7 |
| 391 | 143.16 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 395 | 143.18 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 396 | 143.18 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 404 | 143.23 | temperature | 20.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 460 | 143.67 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 482 | 143.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 497 | 143.86 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 501 | 143.87 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 511 | 143.92 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 531 | 143.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 533 | 144.01 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 536 | 144.02 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 543 | 144.03 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 547 | 144.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 572 | 144.11 | temperature | 25.0 | 720 | < th | dose independent | sin | 17 | NA |
| 599 | 144.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 622 | 144.19 | temperature | 25.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 640 | 144.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 643 | 144.22 | temperature | 25.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 650 | 144.23 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 696 | 144.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 700 | 144.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 746 | 144.34 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 757 | 144.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 804 | 144.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 849 | 144.48 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 886 | 144.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 898 | 144.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 5 |
| 920 | 144.55 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 923 | 144.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 6 |