Os03g0229600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Maf-like protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0229600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Maf-like protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.64 | 0.219 | 12.8 | -0.455 | 0.754 | 0.504 | -0.681 | -0.602 | -0.276 | 17.8 | 26.6 | 6239 | -- | -- |
| 21.95 | 0.218 | 12.8 | -0.281 | 0.761 | 0.451 | -0.74 | -- | -0.272 | 17.7 | 26.5 | 7668 | -- | -- |
| 22.76 | 0.222 | 12.8 | -0.453 | 0.75 | 0.501 | -- | -0.617 | -0.273 | 17.8 | 26.71 | 6239 | -- | -- |
| 23.13 | 0.224 | 12.8 | -0.266 | 0.762 | 0.443 | -- | -- | -0.27 | 17.7 | 26.44 | 7668 | -- | -- |
| 49.79 | 0.33 | 12.8 | -0.225 | -- | 0.38 | -- | -0.274 | -0.202 | -- | 27.2 | 6278 | -- | -- |
| 29.51 | 0.255 | 12.8 | -0.0662 | 0.781 | -- | -0.72 | -- | -0.106 | 17.9 | -- | -- | -- | -- |
| 30.77 | 0.26 | 12.8 | -0.0612 | 0.777 | -- | -- | -- | -0.109 | 17.9 | -- | -- | -- | -- |
| 49.97 | 0.331 | 12.8 | -0.172 | -- | 0.368 | -- | -- | -0.187 | -- | 27.1 | 6278 | -- | -- |
| 24.74 | 0.232 | 12.8 | -- | 0.768 | 0.365 | -- | -- | -0.219 | 17.8 | 26.61 | 7674 | -- | -- |
| 62.06 | 0.368 | 12.7 | -0.0845 | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
| 30.87 | 0.26 | 12.8 | -- | 0.778 | -- | -- | -- | -0.102 | 17.9 | -- | -- | -- | -- |
| 50.74 | 0.333 | 12.7 | -- | -- | 0.356 | -- | -- | -0.166 | -- | 27.1 | 6278 | -- | -- |
| 62.25 | 0.368 | 12.7 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 7 | 21.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 13 | 21.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 27 | 21.78 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 53 | 21.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 87 | 21.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 105 | 21.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 180 | 21.94 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 196 | 21.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 203 | 22.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 204 | 22.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 210 | 22.02 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 216 | 22.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 223 | 22.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 224 | 22.03 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 230 | 22.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 245 | 22.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 246 | 22.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 257 | 22.06 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 267 | 22.06 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 271 | 22.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 281 | 22.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 292 | 22.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 297 | 22.07 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 22 |
| 321 | 22.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 340 | 22.10 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 378 | 22.16 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 390 | 22.18 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 411 | 22.21 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 418 | 22.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 420 | 22.22 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 421 | 22.22 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 432 | 22.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 453 | 22.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 455 | 22.28 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 479 | 22.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 482 | 22.33 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 500 | 22.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 519 | 22.36 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 520 | 22.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 538 | 22.37 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 560 | 22.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 569 | 22.39 | humidity | 80 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 589 | 22.41 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 617 | 22.45 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 634 | 22.46 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 666 | 22.50 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 670 | 22.51 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 687 | 22.52 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 709 | 22.53 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 718 | 22.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 735 | 22.55 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 760 | 22.56 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 776 | 22.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 806 | 22.59 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 819 | 22.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 832 | 22.61 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 833 | 22.61 | humidity | 50 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 862 | 22.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 884 | 22.64 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 919 | 22.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 942 | 22.67 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 13 |
| 976 | 22.68 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |