Os03g0227800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0227800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.18 | 0.329 | 14.5 | -0.784 | 0.149 | 0.526 | -0.268 | -1.13 | -0.152 | 13 | 1010 | 9325 | -- | -- |
| 51.78 | 0.335 | 14.4 | -0.474 | 0.189 | 0.615 | -0.338 | -- | -0.107 | 13.2 | 1010 | 6555 | -- | -- |
| 49.29 | 0.327 | 14.5 | -0.78 | 0.148 | 0.551 | -- | -1.17 | -0.15 | 12.5 | 1009 | 9549 | -- | -- |
| 51.73 | 0.335 | 14.4 | -0.455 | 0.154 | 0.579 | -- | -- | -0.0493 | 12.3 | 1009 | 7099 | -- | -- |
| 50.71 | 0.332 | 14.5 | -0.794 | -- | 0.533 | -- | -1.19 | -0.141 | -- | 1009 | 9459 | -- | -- |
| 62.05 | 0.369 | 14.4 | -0.233 | 0.143 | -- | -0.319 | -- | 0.0321 | 12.8 | -- | -- | -- | -- |
| 62.45 | 0.37 | 14.4 | -0.245 | 0.144 | -- | -- | -- | 0.03 | 12.2 | -- | -- | -- | -- |
| 53.2 | 0.34 | 14.4 | -0.465 | -- | 0.587 | -- | -- | -0.0271 | -- | 1009 | 7084 | -- | -- |
| 56.01 | 0.349 | 14.4 | -- | 0.123 | 0.477 | -- | -- | 0.0428 | 12.5 | 1008 | 10077 | -- | -- |
| 63.76 | 0.373 | 14.4 | -0.25 | -- | -- | -- | -- | 0.0278 | -- | -- | -- | -- | -- |
| 64.04 | 0.374 | 14.4 | -- | 0.148 | -- | -- | -- | 0.0573 | 12.2 | -- | -- | -- | -- |
| 56.6 | 0.35 | 14.4 | -- | -- | 0.511 | -- | -- | 0.109 | -- | 1007 | 7304 | -- | -- |
| 65.41 | 0.378 | 14.4 | -- | -- | -- | -- | -- | 0.0556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 2 | 46.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 5 | 46.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 8 | 46.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 9 | 46.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 16 | 46.76 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 22 | 46.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 31 | 46.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 47 | 47.43 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 75 | 48.14 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 89 | 48.40 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 104 | 48.60 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 110 | 48.64 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 15 |
| 112 | 48.65 | temperature | 20.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 119 | 48.68 | temperature | 30.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 127 | 48.72 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 145 | 48.85 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 15 |
| 153 | 48.88 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 7 |
| 154 | 48.88 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 158 | 48.89 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 160 | 48.90 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 188 | 48.98 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 198 | 49.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 214 | 49.07 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 224 | 49.11 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 227 | 49.12 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 234 | 49.15 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 239 | 49.16 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 293 | 49.28 | wind | 7.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 331 | 49.36 | wind | 7.0 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 343 | 49.39 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 347 | 49.39 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 356 | 49.41 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 374 | 49.44 | wind | 7.0 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 396 | 49.47 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 399 | 49.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 402 | 49.48 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 413 | 49.49 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 421 | 49.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 480 | 49.57 | wind | 5.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 493 | 49.58 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 498 | 49.59 | temperature | 25.0 | 720 | > th | dose independent | sin | 21 | NA |
| 543 | 49.65 | wind | 7.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 600 | 49.69 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 615 | 49.70 | humidity | 60.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 624 | 49.71 | wind | 7.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 625 | 49.71 | temperature | 25.0 | 720 | < th | dose independent | sin | 20 | NA |
| 643 | 49.72 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 760 | 49.81 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 796 | 49.84 | humidity | 60.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 817 | 49.85 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 834 | 49.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 835 | 49.87 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 839 | 49.87 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 841 | 49.87 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 842 | 49.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 856 | 49.88 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 912 | 49.91 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 985 | 49.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 17 |